Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq24458 170 9e-41 seq25129 100 1e-19 seq25192 93.3 2e-17 >seq24458 Length=12585 Score = 170 bits (188), Expect = 9e-41 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct 11275 GGAAAAGAAACTAACGAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCG 11216 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||| ||||||||||| Sbjct 11215 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 11174 >seq25129 Length=1129190 Score = 100 bits (110), Expect = 1e-19 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 |||||||||||||||| | ||| || ||||||||||||||| | ||||||| ||||| Sbjct 783219 AGGATTCCCTCAGTAATAGAGAGCAAAGAGGGAAGAGCCCAGCTCTGAATCCCAGCCCCA 783160 Query 77 CGGTGGGGCGCGGGACATGTGGC 99 |||||||| |||||||||||||| Sbjct 783159 CGGTGGGGTGCGGGACATGTGGC 783137 >seq25192 Length=28120255 Score = 93.3 bits (102), Expect = 2e-17 Identities = 82/101 (81%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61 ||||||||||||| ||| |||||| ||||| ||| | |||| ||||||| |||||| | Sbjct 25346714 GAAAAGAAACTAAAGAGGGTTCCCTTAGTAA-GGCAAATGAAGAGGGAAGTGCCCAGTGT 25346656 Query 62 CGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||| ||| | ||| |||| |||||| ||||||| Sbjct 25346655 CGAATCCCCACCCTGTGGTAGGGCATGGGACACATGGCGTA 25346615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230345542080