Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9657 255 9e-66 seq9660 250 4e-64 seq23381 248 1e-63 seq9651 176 7e-42 seq25188 174 3e-41 >seq9657 Length=1201 Score = 255 bits (282), Expect = 9e-66 Identities = 208/248 (84%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 1031 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 973 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | | Sbjct 972 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 914 Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | | | ||| |||||| | | |||||||||||||||||||||||||||||||| Sbjct 913 GGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 854 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 || |||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct 853 TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 794 Query 251 AATCTGTC 258 |||||||| Sbjct 793 AATCTGTC 786 >seq9660 Length=1139 Score = 250 bits (276), Expect = 4e-64 Identities = 207/248 (83%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 150 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 208 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | | Sbjct 209 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 267 Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | | | ||| |||||| | | |||||||||||||||||||||||||||||||| Sbjct 268 GGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 327 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 || |||||||||||||||||||||| ||||||||||||| ||||| |||||||||| || Sbjct 328 TCGCTCCACCAACTAAGAACGGCCACGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 387 Query 251 AATCTGTC 258 |||||||| Sbjct 388 AATCTGTC 395 >seq23381 Length=1557 Score = 248 bits (274), Expect = 1e-63 Identities = 208/249 (84%), Gaps = 7/249 (3%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 116 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 174 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA-GAAGCCAGCCACCAACCA-TAG 132 ||| || | |||||| | |||| | |||||||||| |||| | | || ||| | | Sbjct 175 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAACGAAGTTGGACGCCGACCGCTCG 233 Query 133 TCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | | | ||| |||||| | | ||||||||||||||||||||||||||||||| Sbjct 234 GGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAA 293 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| | Sbjct 294 ATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCT 353 Query 250 CAATCTGTC 258 ||||||||| Sbjct 354 CAATCTGTC 362 >seq9651 Length=1018 Score = 176 bits (194), Expect = 7e-42 Identities = 161/199 (81%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 64 TGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC 123 ||||||||| |||| || | |||||| | |||| | |||||||||||||| | | | Sbjct 1 TGTTATTGC-TCAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGC 58 Query 124 CAACCA-TAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| | | | | | | ||| |||||| | | ||||||||||||||||||||| Sbjct 59 CGACCGCTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATT 118 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || Sbjct 119 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAG 178 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 179 AAAGAGCTCTCAATCTGTC 197 >seq25188 Length=24126677 Score = 174 bits (192), Expect = 3e-41 Identities = 190/247 (77%), Gaps = 9/247 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||| | ||| ||||| | ||||||||||||| ||||||||||||||||| | Sbjct 19822795 GTCAGTGTAGCATGTGTGTGGCCCTGGACATCTAAGGGCAACACAGACCTGTTATTGC-T 19822737 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134 ||| ||| | ||||| | |||| | |||||||||||||| | | | |||| | Sbjct 19822736 CAATCTTGGGT-GGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGACGCTGACCAC--TT 19822680 Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCG---TTATCGGAATTAACCAGACAAAT 191 | || | | || | |||| | | ||| ||||| ||||||||||||||||| Sbjct 19822679 G--GGTGTCACGTAACTAGTTAGCATGCCATTCAGAATTATCAGAATTAACCAGACAAAT 19822622 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 ||||||||||| |||||| |||||||| |||||||||| ||||| | |||||||| ||| Sbjct 19822621 CACTCCACCAATGAAGAACAGCCATGCAGCACCACCCATGGAATCGATAAAGAGCTCTCA 19822562 Query 252 ATCTGTC 258 ||||||| Sbjct 19822561 ATCTGTC 19822555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796605388572