Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01-
02] 25,212 sequences; 1,117,373,619 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq9657 255 9e-66
seq9660 250 4e-64
seq23381 248 1e-63
seq9651 176 7e-42
seq25188 174 3e-41
>seq9657
Length=1201
Score = 255 bits (282), Expect = 9e-66
Identities = 208/248 (84%), Gaps = 6/248 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
Sbjct 1031 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 973
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133
||| || | |||||| | |||| | |||||||||||||| | | || ||| | |
Sbjct 972 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 914
Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
| | | | ||| |||||| | | ||||||||||||||||||||||||||||||||
Sbjct 913 GGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 854
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
|| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||
Sbjct 853 TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 794
Query 251 AATCTGTC 258
||||||||
Sbjct 793 AATCTGTC 786
>seq9660
Length=1139
Score = 250 bits (276), Expect = 4e-64
Identities = 207/248 (83%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
Sbjct 150 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 208
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133
||| || | |||||| | |||| | |||||||||||||| | | || ||| | |
Sbjct 209 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 267
Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
| | | | ||| |||||| | | ||||||||||||||||||||||||||||||||
Sbjct 268 GGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 327
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
|| |||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||
Sbjct 328 TCGCTCCACCAACTAAGAACGGCCACGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 387
Query 251 AATCTGTC 258
||||||||
Sbjct 388 AATCTGTC 395
>seq23381
Length=1557
Score = 248 bits (274), Expect = 1e-63
Identities = 208/249 (84%), Gaps = 7/249 (3%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
Sbjct 116 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 174
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA-GAAGCCAGCCACCAACCA-TAG 132
||| || | |||||| | |||| | |||||||||| |||| | | || ||| | |
Sbjct 175 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAACGAAGTTGGACGCCGACCGCTCG 233
Query 133 TCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189
| | | | ||| |||||| | | |||||||||||||||||||||||||||||||
Sbjct 234 GGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAA 293
Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249
||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
Sbjct 294 ATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCT 353
Query 250 CAATCTGTC 258
|||||||||
Sbjct 354 CAATCTGTC 362
>seq9651
Length=1018
Score = 176 bits (194), Expect = 7e-42
Identities = 161/199 (81%), Gaps = 6/199 (3%)
Strand=Plus/Plus
Query 64 TGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC 123
||||||||| |||| || | |||||| | |||| | |||||||||||||| | | |
Sbjct 1 TGTTATTGC-TCAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGC 58
Query 124 CAACCA-TAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| | | | | | | ||| |||||| | | |||||||||||||||||||||
Sbjct 59 CGACCGCTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATT 118
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 119 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAG 178
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 179 AAAGAGCTCTCAATCTGTC 197
>seq25188
Length=24126677
Score = 174 bits (192), Expect = 3e-41
Identities = 190/247 (77%), Gaps = 9/247 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||| | ||| ||||| | ||||||||||||| ||||||||||||||||| |
Sbjct 19822795 GTCAGTGTAGCATGTGTGTGGCCCTGGACATCTAAGGGCAACACAGACCTGTTATTGC-T 19822737
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134
||| ||| | ||||| | |||| | |||||||||||||| | | | |||| |
Sbjct 19822736 CAATCTTGGGT-GGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGACGCTGACCAC--TT 19822680
Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCG---TTATCGGAATTAACCAGACAAAT 191
| || | | || | |||| | | ||| ||||| |||||||||||||||||
Sbjct 19822679 G--GGTGTCACGTAACTAGTTAGCATGCCATTCAGAATTATCAGAATTAACCAGACAAAT 19822622
Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
||||||||||| |||||| |||||||| |||||||||| ||||| | |||||||| |||
Sbjct 19822621 CACTCCACCAATGAAGAACAGCCATGCAGCACCACCCATGGAATCGATAAAGAGCTCTCA 19822562
Query 252 ATCTGTC 258
|||||||
Sbjct 19822561 ATCTGTC 19822555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796605388572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |