Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq9657 96.9 4e-18 seq23381 95.1 1e-17 seq21471 91.5 2e-16 seq9677 91.5 2e-16 seq9660 91.5 2e-16 seq9651 91.5 2e-16 seq9543 91.5 2e-16 seq9494 91.5 2e-16 seq5737 91.5 2e-16 seq9362 87.8 2e-15 seq21076 84.2 2e-14 >seq9657 Length=1201 Score = 96.9 bits (106), Expect = 4e-18 Identities = 128/174 (74%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| ||| | |||| | | || Sbjct 297 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCTGCCGGCATACTGCAGCTAGG 356 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 357 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 414 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 415 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 468 >seq23381 Length=1557 Score = 95.1 bits (104), Expect = 1e-17 Identities = 130/176 (74%), Gaps = 8/176 (5%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 852 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 793 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG--ACCGCCCGTAATGA 129 |||||| ||||||||| | |||||||||||||| ||||| | || || | || |||| Sbjct 792 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGCC---ATGA 738 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 737 TTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 682 >seq21471 Length=1025 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 444 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 385 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 384 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 327 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 326 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 273 >seq9677 Length=1004 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 419 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 360 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 359 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 302 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 301 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 248 >seq9660 Length=1139 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 883 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 824 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 823 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 766 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 765 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 712 >seq9651 Length=1018 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 688 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 629 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | | || | ||||| Sbjct 628 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTTACGGAAACG-GGGCCATGATT 571 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 570 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 517 >seq9543 Length=1105 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 645 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 704 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 705 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 762 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 763 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 816 >seq9494 Length=1016 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 654 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 713 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 714 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 771 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 772 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 825 >seq5737 Length=1109 Score = 91.5 bits (100), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 602 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 661 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 662 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 719 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 720 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 773 >seq9362 Length=1020 Score = 87.8 bits (96), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| || | |||| | | || Sbjct 271 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 212 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | | |||||||||||| ||||| | ||| | ||||| Sbjct 211 AATAATGGAATAGGAC-TCCTGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 154 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 153 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 100 >seq21076 Length=1011 Score = 84.2 bits (92), Expect = 2e-14 Identities = 126/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCATGG 71 |||||||||| |||||| ||| |||||||||||||| || | |||| | | || Sbjct 680 TTTACTTTGAGAAAATT-GAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 738 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 739 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 796 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 797 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511874948480