Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01-
02] 25,212 sequences; 1,117,373,619 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq9657 197 3e-48
seq9660 183 6e-44
seq23381 136 7e-30
seq25188 113 9e-23
>seq9657
Length=1201
Score = 197 bits (218), Expect = 3e-48
Identities = 201/258 (78%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 933 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 990
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||||||||||||||||||||||| | || | || | |
Sbjct 991 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 1050
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 1051 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 1110
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | |||||||||| || |||||| ||| ||||| ||| ||||||||||
Sbjct 1111 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 1170
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 1171 AAGTCCCTGCCCTTTGTA 1188
>seq9660
Length=1139
Score = 183 bits (202), Expect = 6e-44
Identities = 193/250 (77%), Gaps = 3/250 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 248 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 191
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||||||||||||||||||||||| | || | || | |
Sbjct 190 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 131
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 130 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 71
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | |||||||||| || |||||| ||| ||||| ||| ||||||||||
Sbjct 70 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 11
Query 311 ACGTCCCTGC 320
| ||||||||
Sbjct 10 AAGTCCCTGC 1
>seq23381
Length=1557
Score = 136 bits (150), Expect = 7e-30
Identities = 139/180 (77%), Gaps = 1/180 (1%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 180 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTAC 122
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
|||||| | || | || | | ||| ||||| ||| |||||| | | || |
Sbjct 121 ACTGACTGGCTCAGCTTGTGCCTACCCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCC 62
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| ||||| ||||||| | | ||||||||| || | | | |||||||||| || ||||||
Sbjct 61 CATTCGTGATGGGGATCGGGGATTGCAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAG 2
>seq25188
Length=24126677
Score = 113 bits (124), Expect = 9e-23
Identities = 183/257 (71%), Gaps = 5/257 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| | ||| ||||| ||||||||||||||||
Sbjct 19822697 CTTCTTAGAGGGACAAGTGGCATTCAGCC-ACCCAAGATTGAG-CAATAACAGGTCTGTG 19822754
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC-AGAGCCAACGAGTTCATC 189
||||||||||||| | ||||| ||| | ||||||||||| ||| || | | | |
Sbjct 19822755 TTGCCCTTAGATGTCCAGGGCCACACACATGCTACACTGACTAGA-TCAGCTTGGGCCTA 19822813
Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
||| ||| | ||| ||||| | | || | || || |||| |||| | | |
Sbjct 19822814 CCCTCCGCCAGCAGGCGCAGGTAACCCAATGAACTCCATTCATGATGGGTATAGGGGACT 19822873
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||| || | | ||| |||||| || |||| | ||| ||||| ||| | | |||||
Sbjct 19822874 GCAATACTTCCCTGTGAACAAGGAATTCCCAGTAGGTGCGGGTCATAAGCTCACATTGAT 19822933
Query 310 TACGTCCCTGCCCTTTG 326
| |||||||||| |||
Sbjct 19822934 TTAGTCCCTGCCCATTG 19822950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946961191936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |