Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq17444 149 9e-34 >seq17444 Length=111512 Score = 149 bits (164), Expect = 9e-34 Identities = 194/258 (75%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||| | || ||||||||||| | ||||| ||| |||||| |||||| | Sbjct 42503 GTACAAAGGGCAGGGGCTTAATCAACGCGAGCCT-ATGACCCGCACTTACTGGGAATT-C 42446 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| || |||||||||| ||||| | || Sbjct 42445 CTCCTTCACGGGGAAGAATTGCAATCCCAGATACCCATCACGAATGGGGTTCAAGGGGTT 42386 Query 120 ACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| |||| |||| ||| || | | | ||| || ||||||||||||||| Sbjct 42385 ACCCGCGCCTGCCGGCGGAGGGTGGGCG-CAAGCTGAGCCAGTCGGTGTAGCGCGCGTGC 42327 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||||| | |||||||||||||||||||||||||||||| ||||| || |||| || || Sbjct 42326 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGG-CTGAA 42269 Query 239 AGGC-CATCTCCCTCGAA 255 | | | | ||||||||| Sbjct 42268 CGCCACGTGTCCCTCGAA 42251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751610259785