Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4439 174 3e-41 >seq4439 Length=37377 Score = 174 bits (192), Expect = 3e-41 Identities = 212/283 (75%), Gaps = 6/283 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | |||||||||| ||||||||||||| Sbjct 35449 ATGCTCTTAGCTGAGTGTCCCGTGGGGCCCAAAGCATTTACTTTGAGAAAATTAGAGTGT 35390 Query 98 TCAAAGCAGGCCTTTGCTC--GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| ||| | |||| ||| |||||||| ||||||||| | |||| Sbjct 35389 TCAAAGCAGGCCCGC-CTCCGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 35332 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| |||| | |||||||| ||||| || |||||| | | Sbjct 35331 TCTATTTTGTTGGTTTTCGAAACCGTGGCCATGATTAAGAGGGACAGCCGGGGGCATTCG 35272 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| || |||||||||||||||||| | ||||| |||| | |||||| | Sbjct 35271 TATTGTGCTGCTAGAGGTGAAATTCTTGGACTGGCGCAAGACAGACTAGAGTGAAAGCAT 35212 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||| | |||||||||||||| ||| |||||| || || Sbjct 35211 TTGCCAAGAACGTTTTCATTAATCA-AGAAAGAAAGTCAGAGG 35170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914710377152