Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq17444 172 9e-41 seq51173 120 5e-25 >seq17444 Length=111512 Score = 172 bits (190), Expect = 9e-41 Identities = 162/202 (80%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| || Sbjct 42345 GTCGGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 42287 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAGT 133 ||| | || |||||| | |||| ||||||| |||||| | | || ||| | | Sbjct 42286 CAATC-TCGGGTGGCTGAACGCCACGTGTCCCTCGAAGAAGTTGGACGCCGACCGCTCGG 42228 Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | | | || |||||| | | |||||||||||||||||||||||||||||||| Sbjct 42227 GGGTCGCGTAAATAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 42168 Query 191 TCACTCCACCAACTAAGAACGG 212 || ||||||||||||||||||| Sbjct 42167 TCGCTCCACCAACTAAGAACGG 42146 >seq51173 Length=12932 Score = 120 bits (132), Expect = 5e-25 Identities = 75/81 (93%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| Sbjct 12471 TTAACCAGACAAATCACTCCACCAACTAATAACGGCCATGCACTACCACCCACGGAATCG 12530 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||| Sbjct 12531 AGAAAGAGCTCTCAATCTGTC 12551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796387041219