Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4542 262 7e-68 seq41730 257 3e-66 seq18781 196 8e-48 seq15658 156 7e-36 seq15160 96.9 6e-18 >seq4542 Length=42722 Score = 262 bits (290), Expect = 7e-68 Identities = 216/263 (82%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||||| |||||||||||| ||| || ||||| ||||||||||||||||| | Sbjct 41224 CATCAGTAGGGTGAAACTAACCTGTGTCACAACAGTCTAGCCCCAGCTCACGTTCCCTGT 41283 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||| ||||||| |||| | |||||||||||||||| Sbjct 41284 TAGTGGGTGAACAATCCAACGCTTGATGAATTCTACTTCACAACGATAGGAAGAGCCGAC 41343 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| Sbjct 41344 GTTGAAGGATCAAAAAGTGACGTCGCTATGAACGCTTGGCCACCACAAGCCGGTTATCCC 41403 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||| |||||| || | ||| | | | |||||||| |||| Sbjct 41404 TGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCATAAGGATCGTGAGGC 41463 Query 272 CACACTTTCATGGTTTGTATTCA 294 | | |||||| | ||||||| Sbjct 41464 CCCGCTTTCACAGCCAGTATTCA 41486 >seq41730 Length=1565 Score = 257 bits (284), Expect = 3e-66 Identities = 199/237 (84%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 |||| | ||||| |||| ||||||||||||||||||||| ||||||||| ||| |||| Sbjct 26 CTCACAATGGTCTCAACCTAGCTCACGTTCCCTATTAGTGAGTGAACAATGCAATGCTTG 85 Query 117 CCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG 176 |||||||||||| |||||||||||||| ||||||||||||||||||||| | |||| Sbjct 86 GTGAATTCTGCTTCACAATGATAGGAAGAGCAGACATCGAAGGATCAAAAAGCGATGTCG 145 Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 146 TTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGCCACCTTAA 205 Query 237 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | |||| | || |||||||| ||||| |||||||||||| ||||||| Sbjct 206 AACCCAAAAAGCCAG------AAGGATCGTGAGGCCCCACTTTCATGGTCTGTATTC 256 >seq18781 Length=336953 Score = 196 bits (216), Expect = 8e-48 Identities = 197/256 (77%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||||||||| |||||||||||| |||||| |||||||||| ||||||||| ||| Sbjct 98012 GTAGGGTAAAAC----CTGTCTCATGACAGTCTAATCCCAGCTCACATTCCCTATTGGTG 98067 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 |||||||||||||| | | |||||||||||| ||| |||||||||| ||| || Sbjct 98068 GGTGAACAATCCAAGACCTGGTGAATTCTGCTTCACAGTGACAGGAAGAGCCACCATTGA 98127 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 |||||||| ||| || || | |||||| |||||| |||||||||| || |||||| | Sbjct 98128 AGGATCAAGAAGTGACATCACCATGAACACTTGGCCACCACAAGCCAATTGTCCCTGGGA 98187 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 ||||||||||| || || | || | ||| | | | | |||| | ||||| | Sbjct 98188 TAACTTTTCTGACAGCTTTTGCTTAAAACCCCAAAAGCCAGGAGGACTGTGAGGCCCTGC 98247 Query 277 TTTCATGGTTTGTATT 292 ||||||||| |||||| Sbjct 98248 TTTCATGGTCTGTATT 98263 >seq15658 Length=23622 Score = 156 bits (172), Expect = 7e-36 Identities = 196/266 (74%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| ||||||||||||| ||||| || || ||| | || ||||| | || | Sbjct 14003 TCATCAGTAAGGTAAAACTAACCCATCTCACAACAGTATAATCACAACTCACAT-CCAAA 14061 Query 91 TTA--GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | | |||||||||| |||| ||| | ||||| ||| || ||||||||| Sbjct 14062 TCACAGAGGGTGAACAAGCCAATCCTTCATGCATTCTCCTTGACAATTATAGGAAGATAG 14121 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||| |||| |||||||||||| | | |||||| |||| |||||||||||| || | Sbjct 14122 AACATCAAAGGTTCAAAAAGCAACACCACGATGAACACTTGACTGCCACAAGCCTCTTTT 14181 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268 ||||||| |||||||||| |||||| | | |||| | | | ||||||| || Sbjct 14182 TCCTGTGGCAACTTTTCTGACACCTC---CTTAAAATCCAAAAAGCCAGAAGGATCATTA 14238 Query 269 GGCCACACTTTCATGGTTTGTATTCA 294 ||| |||||||||| |||||||| Sbjct 14239 GGCTCTGCTTTCATGGTCTGTATTCA 14264 >seq15160 Length=38725 Score = 96.9 bits (106), Expect = 6e-18 Identities = 73/85 (86%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||| ||||||| ||||| |||||| ||||| ||| || Sbjct 32801 TCATCAGTAGGGTAAAACTAACCTGGCTCATGATGGTCT-AACCCAACTCACATTCTCTG 32743 Query 91 TTAGTGGGTGAACAATCCAACGCTT 115 ||||||| ||||| |||| |||| Sbjct 32742 TTAGTGGTTGAACGCTCCAGAGCTT 32718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853942904544