Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq12919 358 1e-96 seq1305 123 5e-26 >seq12919 Length=342 Score = 358 bits (396), Expect = 1e-96 Identities = 228/245 (93%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 342 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 283 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 282 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 223 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 222 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 163 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| Sbjct 162 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 104 Query 314 AGGGG 318 ||||| Sbjct 103 AGGGG 99 >seq1305 Length=209648 Score = 123 bits (136), Expect = 5e-26 Identities = 177/244 (73%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-TTTGCTCGAATACATTAGCATGG 132 |||||||||| |||||| |||||||||||||||||| || | | |||| ||| || Sbjct 23177 TTTACTTTGAGAAAATTGGAGTGTTCAAAGCAGGCCGGCTGTTGGCATACTGCAGCTAGG 23236 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 || ||| ||||||||| | | ||||| | |||||||||| |||| || | | ||||| Sbjct 23237 AACAATGGAATAGGAC-TCCAGTTCTGTCTTGTTGGTTTTCAGGAACGGGGCCAAGATTA 23295 Query 193 ATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 | ||||| || |||| | ||||| || ||||||||||||| |||| | Sbjct 23296 AGAGGGACAGCAAGGGGACGAATGTATTGTGCTGCTAGAGGTGAAATTCCTGGACTGGCA 23355 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||| ||| | |||||| || ||||| |||||||||||||||| |||| ||| Sbjct 23356 CAAGATGGCCTAGAGTGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACAGAAG 23414 Query 312 TTAG 315 | || Sbjct 23415 TCAG 23418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914948109504