Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq214 219 7e-55 seq363 100 5e-19 >seq214 Length=2310827 Score = 219 bits (242), Expect = 7e-55 Identities = 202/252 (80%), Gaps = 18/252 (7%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||| | |||||| | |||||||||||||||||||||||||||||| || Sbjct 1400494 GTCAGTGTAGCGCACACACGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 1400552 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134 ||| ||| |||||| | |||| | ||||| ||||||||| | | ||||| | || Sbjct 1400553 CAATCTT-GGGTGGCTGAATGCCACTTGTCCCCCTAAGAAGCTGGACGCCAAC--TGCTC 1400609 Query 135 GATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | |||| ||| ||||| || ||||||||||||| ||||||||||| | Sbjct 1400610 G--GGGGTCGCATAACTAGTTAGCCAGT----CTCTCGTTCGTTATTGGAATTAACCACA 1400663 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 1400664 CAAGTCACTCCACCAACTAAGAACGGCCATGCAACACCACCCACGGAATCAAGAAAGAGC 1400723 Query 247 TATCAATCTGTC 258 | |||||||||| Sbjct 1400724 TCTCAATCTGTC 1400735 >seq363 Length=828347 Score = 100 bits (110), Expect = 5e-19 Identities = 153/214 (71%), Gaps = 12/214 (6%) Strand=Plus/Minus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAATAGTCCC 106 ||| |||||||||||||||| |||| || | || ||| | |||| | |||| | ||||| Sbjct 498394 AAGAGCATCACAGACCTGTTGTTGC-TCTACCT--CATGTTGCTGAATGCCACTTGTCCC 498338 Query 107 TCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG----CTATTTAGCAGGTTAAGGTCT 162 | ||||| | || |||||| | | | | ||| |||||| | | || | Sbjct 498337 TTGAAGAATTTGGACATCAACCACTGAGGGAGCGCATAACTAGTTAGCATGCCACAGTAT 498278 Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 ||| |||| |||| |||||||||||| |||| | || ||||| ||| | |||||| Sbjct 498277 TGTTTGTTAATGGAAATAACCAGACAAACCACTGC----ACAAAGAATGGCAAGGCACCA 498222 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 ||||| | |||| |||||||||| |||||||| Sbjct 498221 TCACCCGTGGAATTTAGAAAGAGCTCTCAATCTG 498188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796587549963