Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq15076 168 1e-39 seq303 111 3e-22 seq271 98.7 2e-18 seq51 91.5 3e-16 seq208 78.8 2e-12 >seq15076 Length=431 Score = 168 bits (186), Expect = 1e-39 Identities = 95/96 (99%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200 GCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 431 GCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAA 372 Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||| Sbjct 371 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 336 >seq303 Length=4456492 Score = 111 bits (122), Expect = 3e-22 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 ||||||||||||| || | ||||||||||||||||||||||||| ||||||| |||||| Sbjct 1575663 AAGGATCAAAAAGTGACATTGCTATGAACGCTTGGCTGCCACAAGTCAGTTATGCCTGTG 1575604 Query 216 GTAACTTTTCTGGCACCTC 234 |||||||||||| |||||| Sbjct 1575603 GTAACTTTTCTGACACCTC 1575585 >seq271 Length=2727973 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/91 (85%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||| || Sbjct 126856 ATCAGTAGGGTAAAACTAACCTACCTCATGATGGTCT-AACCCAACTCACGTTCCCTGTT 126914 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATT 123 || |||||| |||||| |||| ||||| Sbjct 126915 AGCAGGTGAAAAATCCAGTGCTTGATGAATT 126945 >seq51 Length=2008526 Score = 91.5 bits (100), Expect = 3e-16 Identities = 180/261 (69%), Gaps = 13/261 (5%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| ||| |||||||||| || | ||| | ||||||||||||||| |||| | Sbjct 1411126 TCATCAGGAGGATAAAACTAACTTGCTTAATGGCAGTCTAAACCCAGCTCGTGTTCATTG 1411067 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| |||| || ||||| ||| | ||| || | | ||| ||||| |||| | Sbjct 1411066 TTAACGGGTAAATCGACCAACACTT--GGCATTTTG--TGG---TGACAGGAAAAGCCCA 1411014 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| || | | ||| ||| | |||| | ||||||||| || | |||| || Sbjct 1411013 CATGAAAAGGT--TGAAGTAACTTTGCTAGTA---GTTGGCTGCCCCAGGGTAGTTTTCT 1410959 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||||||||||||||| || |||| || | ||| | || | | | | |||| || Sbjct 1410958 CTGTGGTAACTTTTCTATCATCTCTTGCTTAAAACCTAGAAAGTC-AGAAGATCCTGAGA 1410900 Query 271 CCACACTTTCATGGTTTGTAT 291 ||||||| ||||| ||||| Sbjct 1410899 CCACACTAGCATGGCCTGTAT 1410879 >seq208 Length=10716662 Score = 78.8 bits (86), Expect = 2e-12 Identities = 56/63 (89%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||| | |||| |||||||||||||||| ||||| |||||||||||| |||||| Sbjct 3575417 GTCATCAGTAAGATAAATCTAACCTGTCTCATGATGGTCT-AACCCAGCTCACATTCCCT 3575359 Query 90 ATT 92 || Sbjct 3575358 CTT 3575356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854164843488