Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq15076 367 4e-99 seq739 179 1e-42 seq170 167 8e-39 seq511 138 4e-30 seq11462 82.4 2e-13 seq438 82.4 2e-13 >seq15076 Length=431 Score = 367 bits (406), Expect = 4e-99 Identities = 271/309 (88%), Gaps = 9/309 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 304 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 245 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 244 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 185 Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| |||| ||||||| || || |||| ||| |||| |||| |||||||||| Sbjct 184 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 126 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 ||| |||||||| |||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct 125 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 69 Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||| ||||| | ||| ||||||| ||| ||||||||||||||||||||||| Sbjct 68 TTATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 10 Query 303 CTTCTTTCC 311 ||||||||| Sbjct 9 CTTCTTTCC 1 >seq739 Length=160496 Score = 179 bits (198), Expect = 1e-42 Identities = 157/196 (80%), Gaps = 7/196 (4%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| |||||||| |||||| |||| |||||| | |||||| || |||||| Sbjct 14552 CTCCCATTTATTCTATACCTCTGAAGTATCTTCACAGCACCAGACTAGGGTTGTGCTCAA 14493 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| |||||||| |||||| |||| ||||||||||||||| || | Sbjct 14492 CAGGGTCTTCTTTCCCTGCTGATTCTTTCAAGCCTGTTCTCTTGGCTGTGGTTTCACTGG 14433 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||| |||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct 14432 CTAGTAAGTAGGGACAGTGG-------GTTCATCCATTCATGCATATCACTAATTGGATG 14380 Query 417 ACGAGGCATTTGGCTA 432 | |||||||||||||| Sbjct 14379 ATGAGGCATTTGGCTA 14364 >seq170 Length=1260713 Score = 167 bits (184), Expect = 8e-39 Identities = 153/193 (79%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||||||||| |||| | | ||| |||||| | |||||||||| || |||||| Sbjct 312270 CCACTTATTCTATACCTTTTATGTCTCTTCACAGCACCAAACTAGAGTCATGCCCAACAG 312329 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||| ||| |||||||| ||| || ||| |||||||||||||||| || || Sbjct 312330 GGTCTT---TCCTTGCTGATTCTACCACACCTGTTTCCTTGGCTGTGGTTTCACTGGAGG 312386 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||| |||||||| | ||||||| ||| ||||||||||| | ||||||||||||| || Sbjct 312387 GTAGGTAGGGACAATAGGAATCTTGTTCATCCATTCATGTACATCACTAATTAGATAACA 312446 Query 420 AGGCATTTGGCTA 432 |||||||||| || Sbjct 312447 AGGCATTTGGTTA 312459 >seq511 Length=1582376 Score = 138 bits (152), Expect = 4e-30 Identities = 121/149 (81%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 ||||||||||||||| ||||||||||||| ||||||||| || |||| || ||||| Sbjct 1075912 GAGTCAAGCTCAACAAGGTCTTCTTTCCCTGCTGATTCCACCCAGCCTCTTTGACTGGCT 1075853 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 |||||||| || |||||||| |||||||||| |||||||| || | |||||| || | Sbjct 1075852 GTGGTTTCACTGGATAGTAGGTAGGGACAGTAGGAATCTCATTCTTTGGTTCATGTGCAT 1075793 Query 404 CACTAATTAGATGACGAGGCATTTGGCTA 432 ||| || ||||| ||||||||||||| Sbjct 1075792 CAC--AT--CATGACAAGGCATTTGGCTA 1075768 Score = 86.0 bits (94), Expect = 2e-14 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||| |||| ||||||| |||| |||| | ||||||||||| |||||| Sbjct 1076120 CTTTTGCTCTGTGGGAGGTTTCTGTCCTCCCTGAGCTCAGCTTAGGACACCCATGTTATG 1076061 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 103 ||| ||| ||||| ||||||| ||||||||| ||| Sbjct 1076060 CTTTGGCAGGTGTGCTGCCCCAGTCAAACTCCCAACC 1076024 >seq11462 Length=292 Score = 82.4 bits (90), Expect = 2e-13 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 248 >seq438 Length=2360484 Score = 82.4 bits (90), Expect = 2e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 49 TAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 ||||||||||| |||||| ||| |||| ||| ||||||||| ||||||||||||||| || Sbjct 2106836 TAGGACACCTGTGTTATGCTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCA 2106895 Query 109 ATGTC 113 |||| Sbjct 2106896 CTGTC 2106900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634749943904