Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq109445 269 1e-69 seq896 86.0 3e-14 seq1256 75.2 5e-11 >seq109445 Length=213 Score = 269 bits (298), Expect = 1e-69 Identities = 180/198 (91%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 16 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 75 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 76 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 135 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 136 GCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 195 Query 558 CATAGCTGTTGGGACCCG 575 |||||||||||||||||| Sbjct 196 CATAGCTGTTGGGACCCG 213 >seq896 Length=1180403 Score = 86.0 bits (94), Expect = 3e-14 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||| ||||||||||||| | || |||| ||||| | | ||||| | ||||| Sbjct 1099607 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTCGTAAACTCCATCTAAGGTTAAAT 1099548 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | |||| ||||||||||| |||||||| | | ||||| |||||| | |||| Sbjct 1099547 ACTGGCACAAGACCGATAGCCCACAAGTACCATAAGGGAAAGCTGAAAAAAAGTTTG 1099491 >seq1256 Length=1756643 Score = 75.2 bits (82), Expect = 5e-11 Identities = 68/86 (79%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 ||||| ||| ||||| ||| | ||||||||||| ||||| | ||||||||||| | || Sbjct 1593471 AGATGATGAGCTATGGCTGGACAGGGTGAAGCCGGAGGACATTCTGGTGGAGGTCTGTAG 1593530 Query 638 CGGTTCTGGCGTGCAAATCGATCGTC 663 | || ||| |||||||| | ||||| Sbjct 1593531 CAGTCCTGATGTGCAAATTGGTCGTC 1593556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2074286492200