Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq109445 269 1e-69
seq896 86.0 3e-14
seq1256 75.2 5e-11
>seq109445
Length=213
Score = 269 bits (298), Expect = 1e-69
Identities = 180/198 (91%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 16 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 75
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498
||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 76 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 135
Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| || || ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 136 GCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 195
Query 558 CATAGCTGTTGGGACCCG 575
||||||||||||||||||
Sbjct 196 CATAGCTGTTGGGACCCG 213
>seq896
Length=1180403
Score = 86.0 bits (94), Expect = 3e-14
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||||||||||||| | || |||| ||||| | | ||||| | |||||
Sbjct 1099607 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTCGTAAACTCCATCTAAGGTTAAAT 1099548
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
| |||| ||||||||||| |||||||| | | ||||| |||||| | ||||
Sbjct 1099547 ACTGGCACAAGACCGATAGCCCACAAGTACCATAAGGGAAAGCTGAAAAAAAGTTTG 1099491
>seq1256
Length=1756643
Score = 75.2 bits (82), Expect = 5e-11
Identities = 68/86 (79%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
||||| ||| ||||| ||| | ||||||||||| ||||| | ||||||||||| | ||
Sbjct 1593471 AGATGATGAGCTATGGCTGGACAGGGTGAAGCCGGAGGACATTCTGGTGGAGGTCTGTAG 1593530
Query 638 CGGTTCTGGCGTGCAAATCGATCGTC 663
| || ||| |||||||| | |||||
Sbjct 1593531 CAGTCCTGATGTGCAAATTGGTCGTC 1593556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2074286492200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |