Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq13388 219 7e-55
seq5559 100 5e-19
>seq13388
Length=27585
Score = 219 bits (242), Expect = 7e-55
Identities = 202/252 (80%), Gaps = 18/252 (7%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||| | |||||| | |||||||||||||||||||||||||||||| ||
Sbjct 17374 GTCAGTGTAGCGCACACACGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 17316
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134
||| ||| |||||| | |||| | ||||| ||||||||| | | ||||| | ||
Sbjct 17315 CAATCTT-GGGTGGCTGAATGCCACTTGTCCCCCTAAGAAGCTGGACGCCAAC--TGCTC 17259
Query 135 GATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186
| |||| ||| ||||| || ||||||||||||||||||||||||| |
Sbjct 17258 G--GGGGTCGCATAACTAGTTAGCCAGT----CTCTCGTTCGTTATCGGAATTAACCACA 17205
Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246
||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 17204 CAAGTCACTCCACCAACTAAGAACGGCCATGCAACACCACCCACGGAATCAAGAAAGAGC 17145
Query 247 TATCAATCTGTC 258
| ||| ||||||
Sbjct 17144 TCTCACTCTGTC 17133
>seq5559
Length=29073
Score = 100 bits (110), Expect = 5e-19
Identities = 150/209 (72%), Gaps = 12/209 (6%)
Strand=Plus/Plus
Query 53 CATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAATAGTCCCTCTAA 111
||||||||||||||| |||| || | || ||| | |||| | |||| | |||||| ||
Sbjct 514 CATCACAGACCTGTTGTTGC-TCTACCT--CATGTTGCTGAATGCCACTTGTCCCTTGAA 570
Query 112 GAAGCCAGCCACCAACCATAGTCGATGGGG----CTATTTAGCAGGTTAAGGTCTCGTTC 167
||| | || |||||| | | | | ||| |||||| | | || | |||
Sbjct 571 GAATTTGGACATCAACCACTGAGGGAGCGCATAACTAGTTAGCATGCCACAGTATTGTTT 630
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
|||| |||| ||||||||||||||||| | || ||||| ||| | |||||| ||||
Sbjct 631 GTTAATGGAAATAACCAGACAAATCACTGC----ACAAAGAATGGCAAGGCACCATCACC 686
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTG 256
| | |||| |||||||||| ||||||||
Sbjct 687 CGTGGAATTTAGAAAGAGCTCTCAATCTG 715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794743936284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |