Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq13388 89.7 1e-15 seq8196 84.2 4e-14 >seq13388 Length=27585 Score = 89.7 bits (98), Expect = 1e-15 Identities = 85/105 (81%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 68 CCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 || ||||||||| ||||| | ||| | |||| | ||| ||||| |||||||||||| Sbjct 17272 CCAGCTTCTTAGGGGGACAAGTGGCATTCAGCC-ACCCAAGATTGAG-CAATAACAGGTC 17329 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||||||| | |||||| | ||||||||||||| Sbjct 17330 TGTGATGCCCTTAGATGTCCGGGGCCGTGTGTGCGCTACACTGAC 17374 >seq8196 Length=20820 Score = 84.2 bits (92), Expect = 4e-14 Identities = 139/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||| | |||| ||| || |||||||||| | || | || | | Sbjct 718 TGATGCCCTTAGATGTCCAGGGCTACACATGCACTACACTGACTGGCTCAGCTTGTGCCT 777 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||| ||||| || ||| | | | || | | | ||| ||||| | | || Sbjct 778 ACCCTCCGCCGGCTGGCGCAGGTCACCCATTGAACCCCATTTGTGATGGGGGTCATGGAT 837 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||| || | | | |||||||||| || |||||| ||| ||||| | | ||||| Sbjct 838 AGCAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGAGCGGGTCAT--ACTTGTGTTGA 895 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||| |||||||||| ||||| Sbjct 896 TTAAGTCCCTGCCCCTTGTA 915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944677000192