Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq135185 194 5e-47
seq33018 179 1e-42
seq82070 170 6e-40
seq17889 138 4e-30
seq3564 77.0 1e-11
>seq135185
Length=253
Score = 194 bits (214), Expect = 5e-47
Identities = 118/125 (94%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 128 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 187
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 188 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 247
Query 127 GGCCC 131
||||
Sbjct 248 AGCCC 252
>seq33018
Length=19436
Score = 179 bits (198), Expect = 1e-42
Identities = 157/196 (80%), Gaps = 7/196 (4%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||| |||||||| |||||| |||| |||||| | |||||| || ||||||
Sbjct 13861 CTCCCATTTATTCTATACCTCTGAAGTATCTTCACAGCACCAGACTAGGGTTGTGCTCAA 13920
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||| |||||||| |||||| |||| ||||||||||||||| || |
Sbjct 13921 CAGGGTCTTCTTTCCCTGCTGATTCTTTCAAGCCTGTTCTCTTGGCTGTGGTTTCACTGG 13980
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||| |||||||||||| ||| |||||||||||| ||||||||| ||||
Sbjct 13981 CTAGTAAGTAGGGACAGTGG-------GTTCATCCATTCATGCATATCACTAATTGGATG 14033
Query 417 ACGAGGCATTTGGCTA 432
| ||||||||||||||
Sbjct 14034 ATGAGGCATTTGGCTA 14049
>seq82070
Length=2248
Score = 170 bits (188), Expect = 6e-40
Identities = 154/193 (80%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299
|||||||||||| |||| | | ||| |||||| | |||||||||| || ||||||
Sbjct 1568 CCACTTATTCTATACCTTTTATGTCTCTTCACAGCACCAAACTAGAGTCATGCCCAACAG 1509
Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359
| |||||||| |||||||| ||| || ||| |||||||||||||||| || ||
Sbjct 1508 G---TTCTTTCCTTGCTGATTCTACCACACCTGTTTCCTTGGCTGTGGTTTCACTGGAGG 1452
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
|||| |||||||| | ||||||| ||| ||||||||||| | ||||||||||||||||
Sbjct 1451 GTAGGTAGGGACAATAGGAATCTTGTTCATCCATTCATGTACATCACTAATTAGATGACA 1392
Query 420 AGGCATTTGGCTA 432
|||||||||| ||
Sbjct 1391 AGGCATTTGGTTA 1379
>seq17889
Length=88168
Score = 138 bits (152), Expect = 4e-30
Identities = 121/149 (81%), Gaps = 4/149 (3%)
Strand=Plus/Plus
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343
||||||||||||||| ||||||||||||| ||||||||| || |||| || |||||
Sbjct 55244 GAGTCAAGCTCAACAAGGTCTTCTTTCCCTGCTGATTCCACCCAGCCTCTTTGACTGGCT 55303
Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403
|||||||| || |||||||| |||||||||| |||||||| || | |||||| || |
Sbjct 55304 GTGGTTTCACTGGATAGTAGGTAGGGACAGTAGGAATCTCATTCTTTGGTTCATGTGCAT 55363
Query 404 CACTAATTAGATGACGAGGCATTTGGCTA 432
||| || ||||| |||||||||||||
Sbjct 55364 CAC--AT--CATGACAAGGCATTTGGCTA 55388
Score = 80.6 bits (88), Expect = 9e-13
Identities = 76/97 (78%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||| |||| ||||||| |||| |||| | ||||||||||| ||||||
Sbjct 55036 CTTTTGCTCTGTGGGAGGTTTCTGTCCTCCCTGAGCTCAGCTTAGGACACCCATGTTATG 55095
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 103
|| ||| ||||| ||||||| ||||||||| |||
Sbjct 55096 CGTTGGCAGGTGTGCTGCCCCAGTCAAACTCCCAACC 55132
>seq3564
Length=109447
Score = 77.0 bits (84), Expect = 1e-11
Identities = 56/65 (86%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 49 TAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108
||||||||||| |||||| ||| |||| ||| ||||||||| ||||||||| ||||| ||
Sbjct 70483 TAGGACACCTGTGTTATGCTTTGACAGGTGTACCGCCCCAGTCAAACTCCCTACCTGCCA 70424
Query 109 ATGTC 113
||||
Sbjct 70423 CTGTC 70419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1630844415872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |