Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1947 215 8e-54 seq486 176 7e-42 seq1926 102 1e-19 >seq1947 Length=2772361 Score = 215 bits (238), Expect = 8e-54 Identities = 201/252 (80%), Gaps = 14/252 (6%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||| | |||||| | |||||||| |||||||||||||||||||||| | Sbjct 644604 GTCAGTGTAGCGCACACACGGCCCCGGACATCTAAAGGCATCACAGACCTGTTATTGC-T 644662 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134 ||| || | ||||| | |||| | ||||| ||||||||| | | ||||| | || Sbjct 644663 CAATTTTGGGT-GGCTGAACGCCACTTGTCCCCCTAAGAAGCTGGACGCCAAC--TGCTC 644719 Query 135 GATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | |||| ||| |||||| | | ||||||||||||| ||||||||||| | Sbjct 644720 G--GGGGTCGCATAACTAGTTAGCATGCCAGTCTCTCGTTCGTTATTGGAATTAACCACA 644777 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 644778 CAAGTCACTCCACCAACTAAGAACGGCCATGCAACACCACCCACGGAATCAAGAAAGAGC 644837 Query 247 TATCAATCTGTC 258 | |||||||||| Sbjct 644838 TCTCAATCTGTC 644849 >seq486 Length=271 Score = 176 bits (194), Expect = 7e-42 Identities = 106/112 (95%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 160 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 219 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGA 113 |||||||||||||||||||||||| |||| ||| || ||||||||||||||| Sbjct 220 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGA 271 >seq1926 Length=715951 Score = 102 bits (112), Expect = 1e-19 Identities = 155/217 (71%), Gaps = 18/217 (8%) Strand=Plus/Plus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAATAGTCCC 106 ||| |||||||||||||||| |||| || | || ||| | |||| | |||| | ||||| Sbjct 354925 AAGAGCATCACAGACCTGTTGTTGC-TCTACCT--CATGTTGCTGAATGCCACTTGTCCC 354981 Query 107 TCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGC-------TATTTAGCAGGTTAAGG 159 | ||||| | || ||||| | || || || || |||||| | | | Sbjct 354982 TTGAAGAATTTGGACATCAACC---GCTGAGGGAGCGCATAACTAATTAGCATGCCACAG 355038 Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 | ||||| |||| |||| |||||||||||| |||| | || ||||| ||| | ||| Sbjct 355039 TATCGTTTGTTAATGGAAATAACCAGACAAACCACTGC----ACAAAGAATGGCAAGGCA 355094 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 ||| ||||| | |||| |||||||||| |||||||| Sbjct 355095 CCATCACCCGTGGAATTTAGAAAGAGCTCTCAATCTG 355131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796779536931