Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1602 77.0 2e-12 seq486 77.0 2e-12 >seq1602 Length=724 Score = 77.0 bits (84), Expect = 2e-12 Identities = 54/59 (92%), Gaps = 2/59 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 |||||||||||||| || |||||| || ||||||||||| ||||||||||||||||||| Sbjct 57 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 1 >seq486 Length=271 Score = 77.0 bits (84), Expect = 2e-12 Identities = 47/49 (96%), Gaps = 1/49 (2%) Strand=Plus/Plus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 2 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300792524180