Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1685 221 2e-55 >seq1685 Length=1138 Score = 221 bits (244), Expect = 2e-55 Identities = 230/293 (78%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 1076 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 1019 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1018 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 959 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 958 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 899 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| ||||||| || |||||| || ||| ||| Sbjct 898 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 840 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| ||| |||| |||||||||| |||| | ||||| Sbjct 839 TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGAC 787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819178961664