Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1603 441 2e-121 >seq1603 Length=1266 Score = 441 bits (488), Expect = 2e-121 Identities = 293/319 (92%), Gaps = 6/319 (2%) Strand=Plus/Minus Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 317 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 258 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 257 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 198 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 197 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 140 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 139 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 80 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 79 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 20 Query 417 ATGAGCCATTCGCAGTTTC 435 ||||||||||||||||||| Sbjct 19 ATGAGCCATTCGCAGTTTC 1 Score = 248 bits (274), Expect = 3e-63 Identities = 155/167 (93%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 700 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 641 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 640 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 581 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167 |||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 580 TCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGT 534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510359959296