Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq21041 98.7 4e-18 seq20223 78.8 4e-12 >seq21041 Length=171735 Score = 98.7 bits (108), Expect = 4e-18 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||| ||||||||||||| | || | | |||||| | | ||||| ||||||| Sbjct 101347 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGCGAGTGGTAAACTCCATCTAAGGCTAAAT 101406 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | |||| |||||||||||| ||||||| || | ||||| ||||||| |||||| Sbjct 101407 ACCGGCCCGAGACCGATAGCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTG 101463 >seq20223 Length=31061 Score = 78.8 bits (86), Expect = 4e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 ||| ||| |||||||||||| ||| ||||||||||||||||||||| ||| | || Sbjct 741 AGACGGTAAACTATGCCTGAGGAGGTCAAAGCCAGAGGAAACTCTGGTGTAGGTCTGTAG 682 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||| | |||||||| | ||| | |||| |||||| || Sbjct 681 CGGTCCTGACATGCAAATCAGTTGTCCGACCCGGGTCTAGGGGTGA 636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079095239000