Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq13951 302 8e-80 seq27581 224 2e-56 seq15561 219 7e-55 seq35600 194 3e-47 seq35310 84.2 4e-14 seq10030 82.4 1e-13 >seq13951 Length=4493 Score = 302 bits (334), Expect = 8e-80 Identities = 224/262 (85%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct 672 CATCAGTAGGGTAAAACTAACGTGTCTCACGACGGTCTAAACCCAGCTCACATTCCCTAT 731 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||| |||||||||||| |||| ||||||||||| Sbjct 732 TAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAGTGATCAGAAGAGCCGAC 791 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | |||| ||||||||| || |||||||||||||||||| ||||||||||||||||||| Sbjct 792 ACCAAAGGCTCAAAAAGCGACATCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 851 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||| |||||| || | ||| | | | |||||||| |||| Sbjct 852 TGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAAAAGGATCATGAGGC 911 Query 272 CACACTTTCATGGTTTGTATTC 293 | |||||||| ||| ||||||| Sbjct 912 CCCACTTTCACGGTCTGTATTC 933 >seq27581 Length=13679 Score = 224 bits (248), Expect = 2e-56 Identities = 164/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 ||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | Sbjct 10453 AGGATAAAACTAACCTGTCTCATGACAGTCTAAACCCAGCTCACGTTCACGATTAGTTGA 10512 Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 ||||||||||| |||| || ||||||||| |||| | ||||||| |||||| ||| Sbjct 10513 TGAACAATCCAGTGCTTGGTGA-TTCTGCTTCACAATGACAAGAAGAGCTGACATCAAAG 10571 Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 |||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||| Sbjct 10572 GATCAAAAAGTGACCTTGCTATGAACGCTTGGCCGCCACAAGCCAGTTATGCCTGTGGTA 10631 Query 219 ACTTTTCTG 227 ||||||||| Sbjct 10632 ACTTTTCTG 10640 >seq15561 Length=12026 Score = 219 bits (242), Expect = 7e-55 Identities = 156/179 (87%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||||||||||||| |||||||| | |||||||||||||||| ||||||||| Sbjct 1693 CATCAGTAGGGTAAAACTAAGCTGTCTCACAGCAGTCTAAACCCAGCTCATGTTCCCTAT 1752 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||| ||||| || |||||||||||| |||||||||||| |||| Sbjct 1753 TAGTGGGTGAACAACCCAACATTTGGTGAATTCTGCTTCACAATGATAGGAAGACCCGAT 1812 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || ||||||||| ||||| |||| |||||||| ||||||||||||||||||||||| || Sbjct 1813 ATTGAAGGATCAGAAAGCGACGTTGCTATGAATGCTTGGCTGCCACAAGCCAGTTACCC 1871 >seq35600 Length=101233 Score = 194 bits (214), Expect = 3e-47 Identities = 198/258 (77%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| |||||||||| ||||| |||||||| || |||| Sbjct 79969 TCATCAGTAGGGTAAAAC----CTGTCTCATGGTGGTCTGCTCCCAGCTCGTATTTCCTA 79914 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||| ||||||| | |||| |||||||||||| |||| ||||||| ||| Sbjct 79913 TTAGTGGGTGGACAATCCTATGCTTGGTGAATTCTGCTTCACAGTGATGGGAAGAGACGA 79854 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || ||||||||||||||||| || |||||||||| ||||| ||||||||||||||||| Sbjct 79853 CACTGAAGGATCAAAAAGCAATGTTGCTATGAACGAATGGCTTCCACAAGCCAGTTATCC 79794 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||| | ||||||| | |||| | || | || | | | | |||||| | | | Sbjct 79793 TTGTAGCAACTTTTTGGACACCCCCTGCTTGAACCCCCAAAAGCCACAAGGATTGTGAAG 79734 Query 271 CCACACTTTCATGGTTTG 288 || ||||||||||| || Sbjct 79733 CCCTACTTTCATGGTCTG 79716 >seq35310 Length=27446 Score = 84.2 bits (92), Expect = 4e-14 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| |||||||||||||| |||||||| || | |||| ||||||||||||||||| Sbjct 16425 TCATCAATAGGGTAAAACTAAGCTGTCTCACAACAGCCTAACCCCAGCTCACGTTCCCTG 16484 Query 91 TTA-GTGGGTGAA 102 ||| | ||||||| Sbjct 16485 TTAGGGGGGTGAA 16497 >seq10030 Length=70939 Score = 82.4 bits (90), Expect = 1e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| ||||||||||||||||||||||| | ||| ||| ||||||||||||||| Sbjct 32870 TCATCAGTAAGGTAAAACTAACCTGTCTCATGATGATCT-AACTCAGCTCACGTTCCCTT 32928 Query 91 TT 92 || Sbjct 32929 TT 32930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854039614080