Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq22118 91.5 3e-16 >seq22118 Length=27393 Score = 91.5 bits (100), Expect = 3e-16 Identities = 154/223 (69%), Gaps = 14/223 (6%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 |||||| |||||||| ||||||||||||||||||||||| | || |||| Sbjct 3880 AGTTTG-GGCAATAATAGGTCTGTGATGCCCTTAGATGTCCAGG------------CTAC 3834 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || | || | | || || || | |||| |||||| | | || | Sbjct 3833 ACTGACTGGCTCAGCTTGTGCCTACCCCTG-CCAGCAGGTACGGGTAACCCATTGAACCC 3775 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | | ||| ||||||| | || | |||| || | | ||| |||||| || |||||| Sbjct 3774 CATTTGTGATGGGGATCTGGGATAGAAATTTTTCCCTGTGAACAAGGAATTCCCAGTAAG 3715 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||||| ||| || |||||| | ||||||||||| || Sbjct 3714 TGCGGGTCATAAGCTTGCATTGATTGAGACCCTGCCCTTTATA 3672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946800471040