Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq13951 91.5 2e-16 seq20432 73.4 6e-11 >seq13951 Length=4493 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||| | |||| || |||| || || | Sbjct 642 GTACGAGAGGAACCGCAGG-TTCAGACCCCTTG-TGCTTGCACTTGGCTGAGGAGCCACT 585 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||| |||||||||||| || ||||| ||||||||||||||||||||||| Sbjct 584 GGCGCGAGGCTACCATCTGCGGGCTTATGATTGAACGCCTCTAAGTCAGAATCC 531 >seq20432 Length=56241 Score = 73.4 bits (80), Expect = 6e-11 Identities = 86/114 (75%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||| |||| || |||| || || | Sbjct 56065 GTACGAGAGGAACCGCAGG-TTCAGACCCCT-GGTGCGTGCGCTTGGCTGAGGAGCCACT 56122 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||| | |||||||| || ||| | | |||||||||||||||||||||| Sbjct 56123 GGCGCGAGGTGACCATCTGTGGGCTTACGACGGAACGCCTCTAAGTCAGAATCC 56176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818865259520