Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16] 59,555 sequences; 1,223,863,029 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2988 80.6 1e-12 >seq2988 Length=11681399 Score = 80.6 bits (88), Expect = 1e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| |||| ||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 8765808 GGACCTGAAACATGGTGAACTATGCCTGGTCAGGGCAAAGCCAGAGGAAACTCTGGTGGA 8765749 Query 629 GG 630 || Sbjct 8765748 GG 8765747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078722545250