Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16] 59,555 sequences; 1,223,863,029 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4730 82.4 1e-13 >seq4730 Length=1329326 Score = 82.4 bits (90), Expect = 1e-13 Identities = 89/117 (76%), Gaps = 6/117 (5%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| ||| ||||| |||||||||||||||||| ||||| | Sbjct 337265 CTAGTTAGCATGACAGAGTCTTGTTTGTTATTGGAATTAACCAGACAAATTGCTCCAGC- 337323 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||| ||||| || ||||||| ||| ||| ||||| | | |||||||||| Sbjct 337324 ---AAGAATGGCCAGGCGCCACCACTCATGGAACTGAGAAACACC--TCAATCTGTC 337375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796340294955