Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16] 59,555 sequences; 1,223,863,029 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq56714 89.7 2e-12 >seq56714 Length=550 Score = 89.7 bits (98), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 |||||| || | ||| | ||||| ||| ||||||||||||| ||| ||||| ||||||| Sbjct 329 CTCCTTCAGGCGGGGGACGCCCAAGGTGACGTTCTTGGCCGAGACCCCGGCGTAGTGGAA 388 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||| ||| || || || | ||||| | || || || || Sbjct 389 GGTGTTGAGGGTCATCTGGGTGGCTGGTTCTCCCAGCGACTGGGCGGCCAGCGCACCCAC 448 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 449 CATCTCCCCGGG 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083109644059890