Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 2e-17 seq8 93.3 6e-17 >seq2 Length=147128157 Score = 95.1 bits (104), Expect = 2e-17 Identities = 154/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 6 AAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGT 65 ||||| |||||| | ||||| | ||| |||||||||||||||| |||| |||||| | Sbjct 96623530 AAGGGGAGGGACTTTATCAACATGGTCTT-ATGACTCGCGCTTACT-GGAAATTCCTCAT 96623587 Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATTACCCG 124 | | | || |||||| | || ||||||||||| | | |||| || |||||| Sbjct 96623588 TCATGGGGAATAATTGCTGTCCTCGATCCCCATCACAAATGGAGTTCAGCAGGTTACCCA 96623647 Query 125 GACCTGTCGGCC-AAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCC 183 || | |||| ||| ||| | || | || |||||||||| || ||| |||| Sbjct 96623648 CGCCAGCCGGCATAAGCTGAGACACAACTGAGCTAG-TCAGTGTAGCATGCATGCAGCCC 96623706 Query 184 AGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || ||||||||||||||||| | ||||| ||| Sbjct 96623707 A-AATATCTAAGGGCATCACAGGCGTGTTACTGC 96623739 >seq8 Length=71586700 Score = 93.3 bits (102), Expect = 6e-17 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||| ||| Sbjct 42125887 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAA-TTC 42125830 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| | | || ||||||||| | |||||||| |||| Sbjct 42125829 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATTACGA 42125787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751982035190