Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2 120 6e-25 seq8 104 4e-20 >seq2 Length=147128157 Score = 120 bits (132), Expect = 6e-25 Identities = 186/255 (73%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 73 TTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||| | ||| | |||| || || || || || ||||| | |||||| Sbjct 96623779 TTCTTAGAGGGACAAGTGGCATTCAGCC-ATCTGAGATTAAG-CAGTAACACGCCTGTGA 96623722 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||| || ||||| ||| || ||||||||||| ||| | || ||| Sbjct 96623721 TGCCCTTAGATATT-TGGGCTGCATGCATGCTACACTGAC-TAGCTCAGTTGTGTCTCAG 96623664 Query 192 CTT-GGCCGGAAGGTCTGGGTAATCTTGTTAAACT-CTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| || ||||||| | || | |||| | | ||| ||||||| ||| | Sbjct 96623663 CTTATGCCGGCTGGCGTGGGTAA-CCTGCTGAACTCCATTTGTGATGGGGATCGAGGACA 96623605 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| | | | || ||||||| | |||||||||| ||||| || | |||||| Sbjct 96623604 GCAATTATTCCCCATGAATGAGGAATTTCCAGTAAGCGCGAGTCATAAGACCATGTTGAT 96623545 Query 310 TACGTCCCTGCCCTT 324 | |||||| ||||| Sbjct 96623544 AAAGTCCCTCCCCTT 96623530 >seq8 Length=71586700 Score = 104 bits (114), Expect = 4e-20 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 |||| ||||||| | | |||||||||||| | | | |||||||||| || |||||| || Sbjct 42125787 TCGTAATGGGGATCGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGC 42125846 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| |||||||||| |||||||||||||||| Sbjct 42125847 GGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA 42125886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947176642048