Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1 203 1e-49 seq8 113 1e-22 seq16 96.9 1e-17 seq3 78.8 3e-12 >seq1 Length=194437802 Score = 203 bits (224), Expect = 1e-49 Identities = 135/150 (90%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 |||||||||||||| ||| |||||| | | |||||||||||||||||||||||||||| Sbjct 57608914 TTCTACACCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAAGCTCAACAGGGTCTTC 57608973 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||| |||||||| |||||||| ||||||||||||||||||||||| || ||||| || Sbjct 57608974 TTTCCCTGCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCGCTGGAGAGTAGGTA 57609033 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCA 396 |||||||||||||||||||| ||||| ||| Sbjct 57609034 GGGACAGTGGGAATCTCGTTCATCCACTCA 57609063 Score = 134 bits (148), Expect = 5e-29 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 378 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 437 |||||| | ||||||||||| ||| || |||||||||| | | |||||||||||||| Sbjct 179144065 AATCTCACTTGTCCATTCATGCATGTCCCTGATTAGATGACAAAGTATTTGGCTACCTTA 179144006 Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 ||||| ||||||||||| || |||| || | | | ||||||||||||||||||||| Sbjct 179144005 AGAGAACTGTAGTTACTCCCACCATTTATCCACACGTCATTGAATTTCTTCACTTTGACA 179143946 Query 498 TTCAGAGCACTGGGCAGAA 516 ||||| ||||||||||| Sbjct 179143945 TTCAGGATACTGGGCAGAA 179143927 >seq8 Length=71586700 Score = 113 bits (124), Expect = 1e-22 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| |||||| |||| |||| | ||||||||||||||||||| | Sbjct 25866687 CTTCTGCTCCACAGGAGGTTTCTGGCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 25866628 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 ||| |||| ||| ||||||||| |||||||||||||||| Sbjct 25866627 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGA 25866588 >seq16 Length=20042104 Score = 96.9 bits (106), Expect = 1e-17 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||| ||||| || |||| |||||| || | |||| | ||||||||||||||| ||| Sbjct 3945050 TCTTCTGCTCCACGGGAGGTTTCTGGCCTTCCTGAGCTCGCCTTAGGACACCTGCATTAC 3944991 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 | ||| |||| ||| ||||||||| ||||||||| |||||| Sbjct 3944990 GCTTTGACAGGTGTACCGCCCCAGTCAAACTCCCTACCTGA 3944950 >seq3 Length=112045409 Score = 78.8 bits (86), Expect = 3e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| |||||| |||| |||| | |||||||||||||||||||| Sbjct 64830965 CTTCTGCTCCACGGGAGGTTTCTGGCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTATC 64830906 Query 67 GTTTAACAGATGTGCCGCCCCAG 89 ||| |||| ||| || |||||| Sbjct 64830905 CTTTGACAGGTGTACCACCCCAG 64830883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635159675968