Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1826 113 2e-19 >seq1826 Length=106441 Score = 113 bits (124), Expect = 2e-19 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||| | |||||| |||||||||||||||| |||||||| ||||||| Sbjct 12719 CTCCTTGAGGCGGGGGACGCCCAGCGTCACGTTCTTGGCCGACACGCCGGCGTAGTGGAA 12778 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 || | |||||||| ||| ||| ||||| || | | |||| |||| || ||| || Sbjct 12779 CGTGTTGAGGGTCATCTGTGTGGCCGGCTCCCCCAGGGACTGCGCCGCCAGCGCGCCCAC 12838 Query 349204 CATCTCGCCGGG 349215 |||||||||||| Sbjct 12839 CATCTCGCCGGG 12850 Score = 86.0 bits (94), Expect = 3e-11 Identities = 95/126 (75%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 351147 GGTTGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACC 351206 |||||| || || |||| | | || || ||||| ||||||||| |||| |||||| Sbjct 20375 GGTTGAGGCGGAAGGTGGACCAGGGCAGGATGCGC---ACGCGGTGCCCCATCATGGACA 20431 Query 351207 CGTTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCT 351266 ||||| |||||||||||||| ||| ||||| |||||| || || | || ||| | | Sbjct 20432 TCTTGTGCAGCGTGGGCTGGCGGTTGAAGATGACGATGTCACCGTCACACATGTGGCGTT 20491 Query 351267 CCACCT 351272 |||||| Sbjct 20492 CCACCT 20497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084671724809868