Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq102 320 4e-85 seq3329 295 2e-77 >seq102 Length=1015 Score = 320 bits (354), Expect = 4e-85 Identities = 322/414 (78%), Gaps = 7/414 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||||| || |||| |||||||| ||||||||||||||||||||||||||||||| || Sbjct 132 TACCTGACTAAGAAGCCCCGGCTAAATACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 191 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||| |||||||| |||||| | ||| || ||||| |||||| | | ||| Sbjct 192 AAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGTTTTGTAAGTCTGATGT 251 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCAC-GACTAG--AGTGTGTC 179 |||| ||| ||||| ||| || |||||||| | ||| || | | || || ||| Sbjct 252 GAAAACCCGGGGCTCAACTCCGGGATTGCATTGGAAACTATACTGTCAAGCTAGAGTGCA 311 Query 180 AGAGGGGG--GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACC 237 |||||| | |||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct 312 GGAGGGGCAAGCGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACC 371 Query 238 AATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCA 297 |||||||||| || |||| | ||||||| | | || |||| |||||||||||| Sbjct 372 GGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACGTTGAGGCTCGAAGGCGTGGGGAGCA 431 Query 298 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGAT 357 |||||||||||||||||||||||||||||| |||||||| ||||| ||||||| | Sbjct 432 AACAGGATTAGATACCCTGGTAGTCCACGCGGTAAACGATGAATACTAGGTGTTGGGAGT 491 Query 358 TTACTTCCTT--GGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||| || || |||||||| | |||| || |||||||| ||| Sbjct 492 CTATAGGCTTTCAGTGCCGAAGCTAACGTGATAAGTATTCCACCTGGGGAGTAC 545 >seq3329 Length=2772 Score = 295 bits (326), Expect = 2e-77 Identities = 304/390 (78%), Gaps = 11/390 (3%) Strand=Plus/Plus Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80 ||||| |||||||||||||||||||||||||||||||| |||||||||| |||| ||| Sbjct 175 CGGCTTACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGATTTA 234 Query 81 CTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGA--CAGGTGTGAAATCCCCGGGCTTA 138 ||||||||||| ||||||||||||| |||| | || | |||||| | ||||||| Sbjct 235 TTGGGCGTAAAGGGTGCGCAGGCGGTC-TGTAGGGTTCATG-GTGAAAGCGTGGGGCTTA 292 Query 139 ACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCA 198 ||| | | || || || | |||| |||| ||||| | ||||||||| Sbjct 293 ACCCCATA-TAGCCTTGAAAACCGGCAGACTGGAGTACAGGAGAGGTTAGCGGAATTCCA 351 Query 199 CGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTG 258 ||||||| || |||||||||||||| |||||||||||| |||||||||| || ||| Sbjct 352 TGTGTAGCGGTAAAATGCGTAGATATATGGAGGAACACCGGTGGCGAAGGCGGCTAACTG 411 Query 259 GGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 318 | | |||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 412 GTCTGTAACTGACGCTCATGCACGAAAGCGTGGGGAGCAAATAGGATTAGATACCCTAGT 471 Query 319 AGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGGTAACGTAGC 378 ||||||||||||||||||| |||||| || | || || ||| | || || ||| Sbjct 472 AGTCCACGCCCTAAACGATGAGAACTAGATGCT-GGAAT---CTT--TCAGTGTCGCAGC 525 Query 379 TAACGCGTGAAGTTGACCGCCTGGGGAATA 408 |||||| ||||| ||||||| ||| || Sbjct 526 TAACGCAATAAGTTCTCCGCCTGAGGAGTA 555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289467738624