Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq711 113 6e-23 >seq711 Length=2639 Score = 113 bits (124), Expect = 6e-23 Identities = 169/239 (71%), Gaps = 31/239 (13%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| |||||||||||||||| || |||||||| ||| | || || ||| || | Sbjct 1406 CCTTCCAGCACCGGGCAGGCGTCACCCCCTATACATCACCTTGCGGT-TTAGCAGAGAGC 1348 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||| |||||||| |||| ||||| ||| | | Sbjct 1347 TGTGTTTTAGTTAAACAGTTGCTTGGGCCTATTTACTGTGGC------------------ 1306 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 ||||| ||| || ||||||||||||||||||||| | |||||||||| ||||| Sbjct 1305 TCGTTAG--AGC-GT-----CCCTTCTCCCGAAGTTACGGGACGATTTTGCCGAGTTCCT 1254 Query 186 TAACCACAGTTCACCCGAACGCCTTAG--TATTCTCTACCTGACCACCTGTGTCGGTTT 242 | | ||||||| | || | |||||| ||||| | | ||||||||||||||||||| Sbjct 1253 TGGCAACAGTTCTCTCGCTCACCTTAGGCTATTCGC--CTTGACCACCTGTGTCGGTTT 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694331007888