Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq102 536 4e-150 seq3329 488 2e-135 >seq102 Length=1015 Score = 536 bits (594), Expect = 4e-150 Identities = 409/477 (86%), Gaps = 5/477 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 543 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 602 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||||||||||| |||| ||| | Sbjct 603 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGAGATCCCTTGAATAA-C 661 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||| | |||||| | | || |||||||| ||||||||||||||||| Sbjct 662 GGGTAAT-GCCGTTAGCTCTTCGGAGCAGGGAA-GACAGGTGGTGCATGGTTGTCGTCAG 719 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 720 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTTAGTAGC 779 Query 241 CATCA-TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299 || | || | ||||||||||| ||||||||| ||||| ||||||||||||||||| Sbjct 780 CAGCGGTTCGGCCGGGCACTCTAATGAGACTGCCGGGGACAACCCGGAGGAAGGTGGGGA 839 Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATA 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 840 TGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG-CGTAA 898 Query 360 CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATT 419 ||||||| ||||| |||||||| |||||||| || ||| |||||||||||||| Sbjct 899 CAAAGGGAAGCGACCCCGCGAGGGTGAGCAAATCTCAAAAATAACGTCTCAGTTCGGATT 958 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATG 476 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 959 GTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGCGGATCAGCATG 1015 >seq3329 Length=2772 Score = 488 bits (540), Expect = 2e-135 Identities = 406/496 (82%), Gaps = 18/496 (4%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||| |||| Sbjct 560 CGCAAGTGTGAAACTTAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGCGGTT 619 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTG-ACCCCTCTAGAG 125 |||||||| ||||||||||||||||||||| ||||||||||| | | || ||||| Sbjct 620 TAATTCGAGGCAACGCGAAGAACCTTACCAGGTCTTGACATCCCAAGCAAAGCTATAGAG 679 Query 126 ATA-----GAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 ||| |||||| ||| |||||||||| ||||||||||||||||| Sbjct 680 ATATAGTGGAGGTT--ATCTT----------GGTGACAGGTGGTGCATGGTTGTCGTCAG 727 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct 728 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTCAGTTAC 787 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| ||||||| ||||| | |||||||||||| |||||||||||||||||||| Sbjct 788 CATCATTCAGTTGGGGACTCTGAAGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGAT 847 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 ||||||||||||||||||||||||||| |||||||||| ||| ||||||||| | || Sbjct 848 GACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACGCGTACTACAATGGCGCAAAC 907 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 | | | ||||| | | || | ||| | | | |||| | ||||||||||||||| Sbjct 908 AGCGAGATGCGAAGCAGTGATGCTTAGCGGAACTCTTAAAATGCGTCTCAGTTCGGATTG 967 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| | Sbjct 968 GAGTCTGCAACTCGACTCCATGAAGCCGGAATCGCTAGTAATCGCGGATCAGCATGCCGC 1027 Query 481 GGTGAATACGTTCCCG 496 ||||||||||||| || Sbjct 1028 GGTGAATACGTTCTCG 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503845749760