Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq711 260 3e-67 >seq711 Length=2639 Score = 260 bits (288), Expect = 3e-67 Identities = 238/298 (80%), Gaps = 3/298 (1%) Strand=Plus/Plus Query 43 AGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCGGACGACGTATAA 102 ||||||||| |||||||||| || | | || |||||| |||||||| | | | | Sbjct 1713 AGGAGCCGCCGTTGGGATACCACTCTTATTTAATTGGAATTCTAACCTGCTCCCCTG--A 1770 Query 103 CCGTTGAC-GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGT 161 || || ||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 1771 TCGGGGAGAGGGACAGTGTCAGGCGGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGT 1830 Query 162 AACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGC 221 ||||||||||| ||||| ||| ||||| |||| |||||| || || || | || || Sbjct 1831 AACGGAGGCGCTCAAAGGTACTCTCAGATTGGTTGGAAATCAATCGTCGAGCGTAATTGC 1890 Query 222 AAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGA 281 | ||| ||| |||||||| | || |||||| |||||||||||||||||| || ||| Sbjct 1891 AGAAGAGTGCTTGACTGCAAGACTTACAAGTCGAGCAGGGACGAAAGTCGGAAATAGTGA 1950 Query 282 TCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||||| | | |||||| |||||| ||| ||||||||||||||||||||||||| Sbjct 1951 TCCTGCGGTTCAGTATGGAATGGCCGTGGCTTAACGGATAAAAGCTACCCTGGGGATA 2008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982299245056