Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq711 295 2e-77 seq3329 141 3e-31 >seq711 Length=2639 Score = 295 bits (326), Expect = 2e-77 Identities = 339/452 (75%), Gaps = 27/452 (6%) Strand=Plus/Minus Query 133 CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTT 192 ||||||| |||||| |||||||||||||||||||||| | ||| |||||| || Sbjct 434 CGACGCTAGCCCTAAAGCTATTTCGGGGAGAACCAGCTATCGCCGTGTTCGATTGGAATT 375 Query 193 TCACCCCTATCCACAGGTCATCCCCTCAG-TTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 || || ||| ||||| |||||| | ||| |||||||| || |||||||||||||| Sbjct 374 TCTCCGCTAGCCACAACTCATCCAC-CAGCTTTTCAACGATGGTTGGTTCGGTCCTCCAT 316 Query 252 GCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCG-CTTCGGGTCTTGAT 310 ||| | |||| |||||||||| ||||| |||||||| || |||||||||| Sbjct 315 TTGGTTTCACCCAAACTTCAACCTGGTCATGGCTAGATCACAACGGCTTCGGGTCTACGA 256 Query 311 CGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC------CCACACG 364 | ||| | |||||||||| |||||||||||||||||||| | |||| Sbjct 255 CAACTAACTAAGACGCCCTATTAAGACTCGCTTTCGCTACGGCTCCGTGTTTTCCAC--- 199 Query 365 GGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCAC 424 |||||||||| | | || || ||||| || ||||||| ||||||||||||| |||| Sbjct 198 --TTAACCTCGCTAGCTATCGTAA-CTCGCCGGTTCATTCTACAAAAGGCACGCCATCAC 142 Query 425 CTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTAT 484 | | ||||||| |||| ||| ||||| ||| | ||||||||| |||| Sbjct 141 C-----CATAAAAGG-------GCTCTGACTTCTTGTAAGCATACGGTTTCAGGGTCTAT 94 Query 485 TTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTC 544 |||||||| |||||| ||| ||||||||||||||||||||||||| || | ||||||||| Sbjct 93 TTCACTCCGCGCCAGCGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTC 34 Query 545 ACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 | |||||||||||| ||| | | |||||| Sbjct 33 ATTGAGGAGTATTTAGCCTTGCCTGATGGTCC 2 >seq3329 Length=2772 Score = 141 bits (156), Expect = 3e-31 Identities = 123/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 447 GCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACT 506 |||| ||| ||||| ||| | ||||||||| |||||||||||| |||||| ||| || Sbjct 1969 GCTCTGACTTCTTGTAAGCATACGGTTTCAGGGTCTATTTCACTCCGCGCCAGCGGTTCT 1910 Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566 ||||||||||||||||||||||| || | |||||||||| |||||||||||| ||| Sbjct 1909 TTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCATTGAGGAGTATTTAGCCTTGC 1850 Query 567 CGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 | | |||||| | ||||||| || | ||||| Sbjct 1849 CTGATGGTCCAGGCAGATTCCGACAAGGTTTCA 1817 Score = 107 bits (118), Expect = 7e-21 Identities = 119/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 133 CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTT 192 ||||||| |||||| |||||||||||||||||||||| | ||| |||||| || Sbjct 2125 CGACGCTAGCCCTAAAGCTATTTCGGGGAGAACCAGCTATCGCCGTGTTCGATTGGAATT 2066 Query 193 TCACCCCTATCCACAGGTCATCCCCTCAG-TTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 || || ||| ||||| |||||| | ||| |||||||| || |||||||||||||| Sbjct 2065 TCTCCGCTAGCCACAACTCATCCAC-CAGCTTTTCAACGATGGTTGGTTCGGTCCTCCAT 2007 Query 252 GCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 ||| | |||| |||||||||| ||||| ||| Sbjct 2006 TTGGTTTCACCCAAACTTCAACCTGGTCATGGCTAG 1971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817413586944