Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq6337 199 8e-49 seq102 125 1e-26 seq3329 77.0 6e-12 >seq6337 Length=264 Score = 199 bits (220), Expect = 8e-49 Identities = 204/266 (77%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 44 ACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTC 103 ||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||| Sbjct 264 ACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTCCACCCTC 205 Query 104 TCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGC 163 |||| ||||||| ||| ||| ||||||| || ||| ||||||||||| ||||| Sbjct 204 TCAGGCCGGCTATGTATCATCGTCTTGGTGAGCCGTTACCTCACCAACTAACTAATACAG 145 Query 164 CGCGAGCCCATCTTTCAGCGAT------AAATCTTTGGTCAAAGAATGATGCCATCCTCT 217 || |||||||| ||| ||| |||||| ||||| |||||| | ||| Sbjct 144 CGTAAGCCCATCCCACAGTGATGCAGACGCATCTTTAAAGGAAGAAGGATGCC--CTTCT 87 Query 218 GACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGC 277 |||| ||||||||| | |||||| | ||||| || | ||| |||||||||| Sbjct 86 ACTCCTATGGGGTATTAGCAGTAGTTTCCCACTGTTATCCCCCGCTGTGGGGCAGGTTGC 27 Query 278 TCACGTGTTACTCACCCGTCCGCCAC 303 | |||| |||||||||||| |||||| Sbjct 26 TTACGTATTACTCACCCGTTCGCCAC 1 >seq102 Length=1015 Score = 125 bits (138), Expect = 1e-26 Identities = 71/72 (99%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 72 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 13 Query 61 GAGTCTGGGCCG 72 |||||||||||| Sbjct 12 GAGTCTGGGCCG 1 >seq3329 Length=2772 Score = 77.0 bits (84), Expect = 6e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||| |||||||| ||||||||| || || || ||||||||||||||||| Sbjct 72 GGCGTTGCTCGGTCAGGGTTGCCCCCATTGCCGAAAATTCCTTACTGCTGCCTCCCGTAG 13 Query 61 GAGTCTGGGCCG 72 |||||||||||| Sbjct 12 GAGTCTGGGCCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998297604096