Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3329 221 3e-55 seq711 221 3e-55 >seq3329 Length=2772 Score = 221 bits (244), Expect = 3e-55 Identities = 295/402 (73%), Gaps = 10/402 (2%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||||||| |||||||| ||| | | | || Sbjct 2656 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGAGGACGACCCTTGCC 2597 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 |||||| |||| | |||||| | | |||||| |||| | | || |||||| || | Sbjct 2596 CTGGAAACCTTAGTCAATCGGTGTGCAGGATTCTCACCTGCATCTCGTTACTCACACCGG 2537 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGA- 179 |||||||||| | | ||||| ||| | | || | ||||| | ||| || Sbjct 2536 CATTCTCACTTCCTGCCGCTCCAGCACTCCTT-ACGGTATACCTTCAATGCA-ACAGGAA 2479 Query 180 CGCTCCCCTACCCAACCACAC-AGGTTG----CCACAGCTTCGGCGGATAACTTAAGCCC 234 |||||||||||| | || |||| ||| | ||||| |||| |||| Sbjct 2478 CGCTCCCCTACC-ACTTGTACTAGGTACAAATCCATGGTTTCGGTACTATGCTTA-GCCC 2421 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 || || ||| ||||||| | |||| ||| |||||||| ||||||||||||| |||| | Sbjct 2420 CGGTAAATTTTCGGCGCAGGGGCACTCGACTAGTGAGCTGTTACGCACTCTTTGAAGGGT 2361 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 ||||||||| |||||||||||| | |||| ||||| | ||||||||||| ||||| || Sbjct 2360 GGCTGCTTCTGAGCCAACCTCCTAGCTGTCCACGCATCCCCACATCCTTTTCCACTTAGC 2301 Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | || ||| ||||| | ||||||||||||||||||||| Sbjct 2300 ATAGATTTTGGGACCTTAACCGATGATCTGGGCTGTTTCCCT 2259 >seq711 Length=2639 Score = 221 bits (244), Expect = 3e-55 Identities = 295/402 (73%), Gaps = 10/402 (2%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||||||| |||||||| ||| | | | || Sbjct 965 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGAGGACGACCCTTGCC 906 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 |||||| |||| | |||||| | | |||||| |||| | | || |||||| || | Sbjct 905 CTGGAAACCTTAGTCAATCGGTGTGCAGGATTCTCACCTGCATCTCGTTACTCACACCGG 846 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGA- 179 |||||||||| | | ||||| ||| | | || | ||||| | ||| || Sbjct 845 CATTCTCACTTCCTGCCGCTCCAGCACTCCTT-ACGGTATACCTTCAATGCA-ACAGGAA 788 Query 180 CGCTCCCCTACCCAACCACAC-AGGTTG----CCACAGCTTCGGCGGATAACTTAAGCCC 234 |||||||||||| | || |||| ||| | ||||| |||| |||| Sbjct 787 CGCTCCCCTACC-ACTTGTACTAGGTACAAATCCATGGTTTCGGTACTATGCTTA-GCCC 730 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 || || ||| ||||||| | |||| ||| |||||||| ||||||||||||| |||| | Sbjct 729 CGGTAAATTTTCGGCGCAGGGGCACTCGACTAGTGAGCTGTTACGCACTCTTTGAAGGGT 670 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 ||||||||| |||||||||||| | |||| ||||| | ||||||||||| ||||| || Sbjct 669 GGCTGCTTCTGAGCCAACCTCCTAGCTGTCCACGCATCCCCACATCCTTTTCCACTTAGC 610 Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | || ||| ||||| | ||||||||||||||||||||| Sbjct 609 ATAGATTTTGGGACCTTAACCGATGATCTGGGCTGTTTCCCT 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177479225344