Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq102 282 1e-73 seq3329 201 3e-49 seq6337 150 5e-34 >seq102 Length=1015 Score = 282 bits (312), Expect = 1e-73 Identities = 211/246 (86%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 255 CGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGA 314 ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 1 CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA 60 Query 315 TGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAA 374 |||||| |||||||||||| || |||| ||||| |||||||||| || || |||| Sbjct 61 TGCAGCGACGCCGCGTGAGTGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAA 120 Query 375 GATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434 || ||||| |||| ||| | |||||||||||||| ||||||||||||||||||||||| Sbjct 121 GAAAATGAAAGTACCTGACTAAGAAGCCCCGGCTAAATACGTGCCAGCAGCCGCGGTAAT 180 Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494 ||||||||||| ||||||||||||| ||||| ||| |||||||| |||||| ||||| Sbjct 181 ACGTAGGGGGCAAGCGTTATCCGGATTTACT-GGGTGTAAAGGGAGCGTAGACGGTTTTG 239 Query 495 TAAGTC 500 |||||| Sbjct 240 TAAGTC 245 >seq3329 Length=2772 Score = 201 bits (222), Expect = 3e-49 Identities = 198/261 (76%), Gaps = 26/261 (10%) Strand=Plus/Plus Query 255 CGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGA 314 ||| ||| ||||||||||||||||||||| ||||| || ||||||| || ||||| Sbjct 1 CGGCCCAGACTCCTACGGGAGGCAGCAGTAAGGAATTTTCGGCAATGGGGGCAACCCTGA 60 Query 315 TGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAA 374 |||||||||||||||||||||||||||||||||| |||||||||||| | | ||| Sbjct 61 CCGAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTTGTAAAGCTCTGTTGTAAGGGAT 120 Query 375 GA-------------------------TAATGACGGTACTTGAGGAGGAAGCCCCGGCTA 409 || || |||| |||| | | || ||| | ||||| Sbjct 121 GAACCTAGTGAGTAGGAAATGGCTCACTACTGACAGTACCTTACCAGAAAGTCACGGCTT 180 Query 410 ACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGG 469 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| | ||| Sbjct 181 ACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGATTTA-TTGGG 239 Query 470 CGTAAAGGGTGCGTAGGTGGT 490 ||||||||||||| ||| ||| Sbjct 240 CGTAAAGGGTGCGCAGGCGGT 260 >seq6337 Length=264 Score = 150 bits (166), Expect = 5e-34 Identities = 103/116 (89%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| |||||||| ||||||||||| |||||| ||| ||| |||||| ||||||||| Sbjct 149 ATTAGTTAGTTGGTGAGGTAACGGCTCACCAAGACGATGATACATAGCCGGCCTGAGAGG 208 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 209 GTGGACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497446406144