Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq711 163 1e-37 seq3329 143 9e-32 >seq711 Length=2639 Score = 163 bits (180), Expect = 1e-37 Identities = 337/491 (69%), Gaps = 23/491 (5%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAA-GTGATCTACCC 58 |||||| || |||||| | ||| | | ||||||||||| || |||||||| || Sbjct 226 CGAGTCTTAATAGGGCGTCTTAGTTAGTTGTCGTAGACCCGAAGCCGTTGTGATCTAGCC 285 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||| ||||| ||||| | ||| | || |||||| ||||||| || | |||||||| Sbjct 286 ATGACCAGGTTGAAGTTTGGGTGAAACCAAATGGAGGACCGAACCAACCATCGTTGAAAA 345 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | | ||||||| ||||| ||| || |||| | || | ||| || ||||||||||| Sbjct 346 GCTGGTGGATGAGTTGTGGCTAGCGGAGAAATTCCAATCGAACACGGCGATAGCTGGTTC 405 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTC-AAGTATCACCATCGG-GGGTAGAGCACTG-- 234 || |||||| |||||| || || |||| || || |||||||||||| Sbjct 406 TCCCCGAAATAGCTTTAGGGCTAGCGTCGGAGTAAAGATATTGGCAGGTAGAGCACTGAA 465 Query 235 -TTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTG----CAAACTCCGAATGCGCA 289 | ||| | || ||| || ||| |||| ||||||||||||| || Sbjct 466 TTCATG---ATGGCCCCATCCCGGGGTAC----TGATTGGAATCAAACTCCGAATGGTCA 518 Query 290 TCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAA 349 | | || | ||| ||| || | ||| ||||||||||| | | ||| || | Sbjct 519 ATATTGTTTTC-CGGCAGTCAGACTGCGAGTGATAAGGTCCGTGGTCAAAAGGGAAACAG 577 Query 350 TCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTG 409 || || ||| | ||||| ||| |||| ||||||| || || || || | || Sbjct 578 CCCAGATCATCGGTTAAGGTCCCAAAATCTATGCTAAGTGGAA--AAGGATGTGGGGATG 635 Query 410 CTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCT 469 | ||||||||||| ||||||| |||||||||| | || |||||||||||||||||| Sbjct 636 CGTGGACAGCTAGGAGGTTGGCTCAGAAGCAGCCA-CCCTTCAAAGAGTGCGTAACAGCT 694 Query 470 CACTAGTCGAG 480 ||||||||||| Sbjct 695 CACTAGTCGAG 705 >seq3329 Length=2772 Score = 143 bits (158), Expect = 9e-32 Identities = 299/437 (68%), Gaps = 20/437 (5%) Strand=Plus/Plus Query 53 CTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGT 112 ||| ||||| ||||| ||||| | ||| | || |||||| ||||||| || | || Sbjct 1971 CTAGCCATGACCAGGTTGAAGTTTGGGTGAAACCAAATGGAGGACCGAACCAACCATCGT 2030 Query 113 TGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGC 172 |||||| | | ||||||| ||||| ||| || |||| | || | ||| || ||||| Sbjct 2031 TGAAAAGCTGGTGGATGAGTTGTGGCTAGCGGAGAAATTCCAATCGAACACGGCGATAGC 2090 Query 173 TGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCA-AGTATCACCATCGGG-GGTAGAGC 230 |||||||| |||||| |||||| || || |||| || || |||||||| Sbjct 2091 TGGTTCTCCCCGAAATAGCTTTAGGGCTAGCGTCGGAGTAAAGATATTGGCAGGTAGAGC 2150 Query 231 ACTG---TTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTG----CAAACTCCGAA 283 |||| | ||| | || ||| || ||| | ||| ||||||||||| Sbjct 2151 ACTGAATTCATG---ATGGCCCCATCCCGGGGTACTGA----TTGGAATCAAACTCCGAA 2203 Query 284 TGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGA 343 || || | | || | ||| ||| || | ||| ||||||||||| | | ||| Sbjct 2204 TGGTCAATATTGTTTTC-CGGCAGTCAGACTGCGAGTGATAAGGTCCGTGGTCAAAAGGG 2262 Query 344 GAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTC 403 || | || || ||| | ||||| ||| |||| ||||||| || || || || Sbjct 2263 AAACAGCCCAGATCATCGGTTAAGGTCCCAAAATCTATGCTAAGTGGAA--AAGGATGTG 2320 Query 404 TGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTA 463 | ||| ||||||||||| ||||||| |||||||||| | || |||||||||||| Sbjct 2321 GGGATGCGTGGACAGCTAGGAGGTTGGCTCAGAAGCAGCCACCC-TTCAAAGAGTGCGTA 2379 Query 464 ACAGCTCACTAGTCGAG 480 ||||||||||||||||| Sbjct 2380 ACAGCTCACTAGTCGAG 2396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689426714624