Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq711 358 2e-96 >seq711 Length=2639 Score = 358 bits (396), Expect = 2e-96 Identities = 423/570 (74%), Gaps = 22/570 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||||||||| |||||||||| | ||| |||| |||| ||| | ||||| || Sbjct 1924 TCGACTTGTAAGTCTTGCAGTCAAGCACTCTTCTGCAATTACGCTCGACGATTGATTTCC 1865 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| ||||| | ||||||| ||||||||||||| ||||||||| | |||||||||| Sbjct 1864 AACCAATCTGAGAGTACCTTTGAGCGCCTCCGTTACTCTTTGGGAGG-CGACCGCCCCAG 1806 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||| || | ||||||||| ||| ||||| ||| |||||||| |||| Sbjct 1805 TCAAACTACCCGCCTGACACTGTCCCTCTCCCCGATCAGGGGAGCAGGTTAGAATTCCAA 1746 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCAC---AACCA---CTAGCGTGGCCGCAT 234 | | |||||||||| |||| || |||| | | ||| || ||| | Sbjct 1745 TTAAATAAGAGTGGTATCCCAACGGCGGCTCCTCGTAAGCCAAAACTCACGTC------T 1692 Query 235 CATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAA 294 || | |||||||||||||| || | | |||||| ||||| |||| |||||| || Sbjct 1691 CAATGCCTCCCACCTATCCTGTGCATATCTAACCGAAACTCAATATCAAGTTATAGTAAA 1632 Query 295 GGTCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATT 353 | ||| ||||||||| |||| | ||| | ||| ||||||| || ||||| ||| Sbjct 1631 GCTCCATGGGGTCTTTCCGTCTAGTTGCGGGTAACCTGCATCTTCACAGGTACTAAGATT 1572 Query 354 TCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAAC 413 |||||| | ||| | |||||||| | || ||||||| ||||||| |||| |||| Sbjct 1571 TCACCGAGTCTGCTGCCGAGACAGCGCCCAAATCATTACGCCTTTCGTGCGGGTCAGAAC 1512 Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473 ||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct 1511 TTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACTGG 1452 Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533 |||||| || || || ||| || || || | ||| ||| |||||||| Sbjct 1451 GGCTTCGGTTCAAAGCTTCGGACA--------AGTCCTAACTAATCCCCTTGACCTTCCA 1400 Query 534 GCACCGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||||||| || ||||| || Sbjct 1399 GCACCGGGCAGGCGTCACCCCCTATACATC 1370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702225401856