Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq6337 114 3e-23 seq3329 87.8 4e-15 seq102 80.6 6e-13 >seq6337 Length=264 Score = 114 bits (126), Expect = 3e-23 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 164 ACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTC 223 ||||||||||||||||||||||||| |||||||||||| ||||||||| | || |||| Sbjct 264 ACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTCCACCCTC 205 Query 224 TCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAA 283 |||| | |||| ||| | | || |||| ||||||||| | || |||| ||||| | Sbjct 204 TCAGGCCGGCTATGTATCATCGTCTTGGTGAGCCGTTACCTCACCAACTAACTAATACAG 145 Query 284 CGCATCCCCATCGTACACCGATG 306 || | |||||| ||| |||| Sbjct 144 CGTAAGCCCATCCCACAGTGATG 122 >seq3329 Length=2772 Score = 87.8 bits (96), Expect = 4e-15 Identities = 92/120 (77%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 73 TCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGT 132 ||||||| || ||| ||||||| ||| || |||||||| |||||| | | ||| | Sbjct 119 TCCCTTACAACAGAGCTTTACAACCCGAAGG-CCTTCATCGCTCACGCGGCGTTGCTCGG 61 Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| | | |||||| | || |||||| ||||||||||||||||||||| ||| ||| Sbjct 60 TCAGGGTTGCCCCCATTGCCGAAAATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGGCCG 1 >seq102 Length=1015 Score = 80.6 bits (88), Expect = 6e-13 Identities = 131/192 (68%), Gaps = 20/192 (10%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| | ||||||| |||| || | |||||| | || Sbjct 172 GGCTGCTGGCACGTATTTAGCCGGGGCTTCTTAGTCAGGTACTTTCA------------- 126 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 |||| |||||| | | ||| |||||| ||| | || ||| || |||||| Sbjct 125 ------TTTTCTTCCCTGCTGATAGAGCTTTACATACCGAAATAC-TTCTTCACTCACGC 73 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| | || |||||| ||||||||| |||||||||||||||||| Sbjct 72 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 13 Query 181 GAGTTTGGACCG 192 |||| ||| ||| Sbjct 12 GAGTCTGGGCCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068690383872