Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1 104 1e-19 >seq1 Length=114059860 Score = 104 bits (114), Expect = 1e-19 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||| || |||| ||||||||||||| | || |||| |||||| | | ||||| |||||| Sbjct 20830335 CGAGCCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAA 20830276 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || ||| ||| |||||||| ||||||| || | ||||| || |||| |||| | | Sbjct 20830275 TACCGGCACGAGTCCGATAGCTAACAAGTACCGTAAGGGAAAGTTGCAAAGAACTTCGAA 20830216 Query 159 AAGAGAGTTAAA 170 |||||||| || Sbjct 20830215 GAGAGAGTTCAA 20830204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079964071250