Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq7 80.6 4e-13 >seq7 Length=61875929 Score = 80.6 bits (88), Expect = 4e-13 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 175 GAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAA 234 ||||||||||||||||| || ||||||||||||| | ||||||| || ||| | |||| Sbjct 24821083 GAATTAACCAGACAAATTGCTTCACCAACTAAGAAAGACCATGCATCATCACTAACAGAA 24821024 Query 235 TCAAGAAAGAGCTATCAATCTGTC 258 | |||||||||| | |||||| Sbjct 24821023 TTGAGAAAGAGCTCTTCCTCTGTC 24821000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796787070675