Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq6 273 7e-71 seq2 91.5 5e-16 >seq6 Length=71365269 Score = 273 bits (302), Expect = 7e-71 Identities = 178/196 (91%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||||||||||| |||||||| ||| |||||| | | ||||||||||||||||||| Sbjct 64849397 TCCCACTTATTCTATACCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAAGCTCAAC 64849338 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||||||| |||||||| |||||||||||||||||||| || | Sbjct 64849337 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCACTGCA 64849278 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| |||||||||||||||||||||| ||||||||||| || ||||| ||||||||| Sbjct 64849277 TAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGTGCATCACTTATTAGATGA 64849218 Query 418 CGAGGCATTTGGCTAC 433 |||||||||||||||| Sbjct 64849217 CGAGGCATTTGGCTAC 64849202 >seq2 Length=150265477 Score = 91.5 bits (100), Expect = 5e-16 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 || |||| |||||||||||||||||||||||||| || ||||||||||||||||||| | Sbjct 35066078 GCACTTGATTGAATTTCTTCACTTTGACATTCAGGGCTCTGGGCAGAAATCACATTGTAT 35066137 Query 529 CAACA 533 ||||| Sbjct 35066138 CAACA 35066142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635172610400