Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30]
1,675 sequences; 1,020,310,768 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq6 273 7e-71
seq2 91.5 5e-16
>seq6
Length=71365269
Score = 273 bits (302), Expect = 7e-71
Identities = 178/196 (91%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||||||| |||||||| ||| |||||| | | |||||||||||||||||||
Sbjct 64849397 TCCCACTTATTCTATACCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAAGCTCAAC 64849338
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |
Sbjct 64849337 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCACTGCA 64849278
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||| |||||||||||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct 64849277 TAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGTGCATCACTTATTAGATGA 64849218
Query 418 CGAGGCATTTGGCTAC 433
||||||||||||||||
Sbjct 64849217 CGAGGCATTTGGCTAC 64849202
>seq2
Length=150265477
Score = 91.5 bits (100), Expect = 5e-16
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528
|| |||| |||||||||||||||||||||||||| || ||||||||||||||||||| |
Sbjct 35066078 GCACTTGATTGAATTTCTTCACTTTGACATTCAGGGCTCTGGGCAGAAATCACATTGTAT 35066137
Query 529 CAACA 533
|||||
Sbjct 35066138 CAACA 35066142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635172610400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |