Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq293 113 2e-19 >seq293 Length=10804 Score = 113 bits (124), Expect = 2e-19 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| |||||| || ||||||||||||| || ||||| ||||||| Sbjct 10592 CTCCTTGAGGCGGGGCACGCCCAGCGTGACGTTCTTGGCCGACACCCCGGCGTAGTGGAA 10651 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||||||| |||||||| | | |||| | || || ||| || Sbjct 10652 GGTGTTGAGGGTCATCTGCGTGGCCGGCTCGCCCAGGGACTGCGCGGCCAGAGCGCCGAC 10711 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 10712 CATCTCCCCGGG 10723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084693368311650