Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passer_20domesticus_20[genbank_20GCA_5F001700915.1_202016-08-31] 2,301 sequences; 1,042,720,703 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq24 87.8 3e-15 >seq24 Length=61081188 Score = 87.8 bits (96), Expect = 3e-15 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||||||| |||||||| ||||||| |||||||||||| || | ||||| Sbjct 33289845 AATTAACCAGACAAATTGCTCCACCACCTAAGAAAGGCCATGCACCATTACTAACAGAAT 33289904 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 |||||||||| || |||||| Sbjct 33289905 TGAGAAAGAGCTCTCCTTCTGTC 33289927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796782238581