Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passer_20domesticus_20[genbank_20GCA_5F001700915.1_202016-08-31] 2,301 sequences; 1,042,720,703 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq137 113 2e-19 >seq137 Length=132244 Score = 113 bits (124), Expect = 2e-19 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| ||||||||| ||||||||||||| || || || ||||||| Sbjct 97043 CTCCTTGAGGCGGGGCACGCCCAGGGTGACGTTCTTGGCCGACACCCCCGCGTAGTGGAA 96984 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||||||| |||||||| | | |||| | || || ||| || Sbjct 96983 GGTGTTGAGGGTCATCTGCGTGGCCGGCTCGCCCAGGGACTGCGCGGCCAGCGCGCCCAC 96924 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 96923 CATCTCCCCGGG 96912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084676239573198