Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq22824 82.4 9e-14 seq48472 77.0 4e-12 >seq22824 Length=50019 Score = 82.4 bits (90), Expect = 9e-14 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||| ||||| |||||||| ||| |||| | || | Sbjct 28818 AAACCAACAAAATAGAACCGGA-GTCTTATTCCATTATTCCTAGCTGCAGTATGCCGGTG 28876 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||||||| ||||| Sbjct 28877 GCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAA 28915 >seq48472 Length=8899 Score = 77.0 bits (84), Expect = 4e-12 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGC-GTAA 72 ||||||||||| || | ||||||||| |||||||| ||| |||| | || | | Sbjct 1599 CAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCAGCAGCCA 1541 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAA 101 ||||||||||||||||||||||||||||| Sbjct 1540 GCCTGCTTTGAACACTCTAATTTTCTCAA 1512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594831079788