Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq22824 77.0 3e-12 seq48472 75.2 1e-11 >seq22824 Length=50019 Score = 77.0 bits (84), Expect = 3e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| | | |||| | | || Sbjct 28915 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCACCGGCATACTGCAGCTAGG 28856 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||| ||||| ||| | |||||||||||||| ||||| Sbjct 28855 AATAATGGAATAAGAC-TCCGGTTCTATTTTGTTGGTTT 28818 >seq48472 Length=8899 Score = 75.2 bits (82), Expect = 1e-11 Identities = 71/88 (81%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 18 TTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGGAATAA 76 ||||| |||||||||| ||||||||||||| |||| | |||| | | ||||||| Sbjct 1511 TTTGAGAAAATTAGAGTGTTCAAAGCAGGCTGGCTGCTGGCATACTGCAGCTAGGAATAA 1570 Query 77 TAGAATAGGACGTGCGGTTCTATTTTGT 104 | ||||||||| | |||||||||||||| Sbjct 1571 TGGAATAGGAC-TCCGGTTCTATTTTGT 1597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511682649280